| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3985 |
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| Symbol | |
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| ID | 3679659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4943244 |
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| End bp | 4950899 |
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| Gene Length | 7656 bp |
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| Protein Length | 2551 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637719337 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_324485 |
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| Protein GI | 75910189 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACA CTTCAGACAT TAACCAATTA TCTCCATTAC AACGTTCAGT TTTAGCCTTA
AAAGAAATGC GTGCCAAGTT GGACGCAGTG GAGAATGCCA AAACAGCACC AATCGCCATT
ATTGGCATGA ACTGTCGCTT TCCTGGGGGA GCCGACTACC CTGAGAAATT CTGGGAATTA
CTCCACAATG GGGTAGACAC TATCACTGAA GTTCCGGCTG ACAGATGGGA CGTGGATGAG
TATTACAATG CAAATCCCAA CACTCTGGGG AAAATTTACA CCCGATATGG TGGGTTTATT
AAACAGGTAG ATCAATTTGA TCCCCATTTC TTTGGACTTT CCCCTCTAGA AGCAGCCAGC
ATGGACCCCC AGCATCGGCT ACTGCTGGAG GTGGGCTGGG AAGCAATAGA AAACGCCGGA
CAATCCCCAG AGGAATTAAA CGGCAGCCAG ACGGGAGTCT TTATGGGACT CTTTATGGAA
GATTATTCCC GCTTTAACCT ATATTCTGGA GATCATCACC GCATTGATGC TTACAGCAGT
TTAGGAAATG CTCGGAGTAT TGCCATCGGT CGCCTAGCTT ATGTCTTGGG CTTGCAAGGC
CCTGTGATGC AGTTAGACAC AGCTTGTTCT TCTTCGTTGC TAGCAGTTCA CCTGGCTTGT
CAGAGCTTGC GTTCAGGTGA GTGCAATATG GCTTTAGCGG GTGGAGTCAA CTTGATCTTA
GCACCGGAAG CTTCTATTGG TCTGAGTAGA ATGAGGGCGC TGGCTCCAGA TGGTCGTTGT
AAGACCTTTG ATGCCAAAGC CGATGGTTAT GTACGTGGAG AAGGCTGCGG CATAGTCGTA
CTCAAGCGTT TATCAGATGC GATCGCTAAC AATGATAATA TTTTGGCTGT GGTACGAGGC
TCGGCAGTTA ATCACGACGG TGCTAGCAGT GGTTTGACAG TACCGAATGG GCTAGCTCAA
GAGAAGTTGA TTAATCAGGC GCTCACCAAC GCTAAGGTAG CACCAGAACA AATTAGTTAT
GTAGAAACCC ACGGTACAGG CACATCTTTG GGAGATCCCA TAGAAGTGAG AGCTTTAGGC
TCAGTGTTGT GTCAAGGACG TTCTCCAGAG CAACCATTGT TGATTGGTTC GGTGAAAACT
CAGTTGGGTC ACTTAGAATC TGCTGCGGGA GTTGCCAGTT TAATGAAAGT GGTGCTGGCT
TTACAAAATG CAGAGATACC GCCACATCTG CATTTACAAC AGCCCAGTCC TCATATTCCT
TGGGACAAAC TGGCAGTTGC TGTGCCAACT AAGCCAACTC CGTGGCCGGC AGTTAACGGG
AAACGCTTGG CTGGGGTTAG TTCTTTTGGT ATGAGTGGCA CTAATGCCCA TCTGATTATC
GAAGAAGCAC CGGAATTGAA ATTAGAGCTG CCGAAAACTG AGCGTCCACT CCACCTGCTA
AGTTTATCGG CCAAAACTGA GGCAGCACTA CTGGCAATGG CTAGCCGCTA TGAATCTTTT
TTAACATCCC ATCCAGAAAC ATCTTTAGCA GATATTTGTT TTACAGCCAA CACCGGGCGA
TCGCATTTTG AACACCGTCT TGCTGTTGTC GCTGCATCTA ACGCAGACTT GCGCGAACAA
CTAACCGCTT TTGCTAGCCA AAAGCAGACC AGCACGTCAG TCAGTGGTCA AGTACAGAAG
AAGCGTTCCA AAGTTGTATT CCTGTTTACA GGACAAGGCT CTCAATACGT GGAAATGGGA
CGACAACTTT ACGAAACTCA GCCGACGTTC CGTAAGACTT TAGACCGATG CGATGAGATT
TTGCGTCCCT ATCTCCAGCA GCCTTTGTTG TCAGTACTTT ACCCCACATC TGATGTTACT
TCCCCTTTGA ATGAAACAGC ATATACTCAA CCAGCACTGT TTGCTTTAGA GTACTCCCTC
GCTGAAATGT GGAAATCTTG GGGAATTGTA CCAGATGCAG TCATGGGTCA CAGCGTGGGT
GAATATGTAG CCGCTTGCGT TGCTGGAGTG TTCAGCTTGG AAGATGGGCT GAAATTAATC
GCCGAGAGGG GGCGTTTAAT TCAATCTCTA CCCCAAAATG GCATGATGGC GGCAGTGTTC
ACCAATGAAG CACGGATGAA TGGCATTTTA GCTGCTTACA CAGGGCAAGT GGCAATTGCC
GGGATTAATG GCCCAGAAAA TATTGTTATT TCTGGAGCCA GAGAAGCAGT CCAATCTGTG
CTGAAAGAAT TGGCAACTCA AGGAATTAAC GCCCAACCAT TGCAGGTTTC CCACGCGTTC
CACTCCCCTT TAATGGCTAG TATCCTCGAT CCCTTTGAGC AGATAGCTAG CTCGGTGCAG
TTTCAAGCGC CGCGTATTCC CCTCATCTCG AATTTGACTG GACAAATACT AAAACCCAAC
GAAATTCCCC ATGCAGCTTA CTGGCGACAG CATCTTAGAG AGGGAGTAAG ATTTTATGCC
GGCATCAAGA CGCTACATGA ACAAGGGTAT GAAATCTTTG TAGAAATGGG GCCGAGTACC
ACATTAGTAG GCATGGGTAA AAGATGCTTG CCAGAAGGTG CAGGTACTTG GCTAACTTCT
CTGAAAAAAG GACAACCAGA CTGGTCACAA TTGCTTGCTA GTTTAAGTGA GTTGTACATC
AGGGGGATAA AAATCAATTG GACTGCATTT GACCAAGGTT ATCAGCGTCG CCGCCTGGCA
CTACCAACCT ACCCATTTCA ACGCCAACGC TACTGGGTGG AAAACCTCTC TCCAAACCTC
TCTCCTACGA GGAGAGAGGC TTTGAATTCT CCCCCTTCCC TACAAGGGAA GGGGGCTGGG
GGGTTAGGTT TTACTTCAGC TATTCCCCCC AAAGCTTTGC CAAAAATTCC GCTTTCTGTA
CCATCGAATT GGTTTCATAG TTGGCAATGG ACTCCAGAGG TGTTGAGCCA ATCTCAAGAT
ATTCCTTCAG GGGCAATTTT GATCTTTAGC GATCGCCACC AAGTAGGGGA AAATTTAGCA
AAGCTCTTCG ACGCTAAAAA GTACACGACA TATTTTGTCA CCCCAGGGGA GAGCTTCACC
CAAACAGCAG GACACTTTAC TATAAATCCA GCATCCGTTG CCGACTACGA ACAACTGATC
CAAAATATCA AAGCACAGGG TGTGACAGTC ACCGCAGCCG TGCATCTGTG GAACTATAGT
TTGTGGGCAA CATCCCCAGA ACAACTACTA GAAAATGACC GCCTACTCAA TGAACGCGTT
TACAGTCTTT TGTTTTTGAC ACAGGCGCTA GTTAAACATT ACCCAGCCTC TCCCCTCAAT
TTCTTAGTGG TAACTCAAGG TGCTTATCCA ATATCTCCAA ATGATTCCTT ACACGGTGTA
CATCAGTCTA TGGCAGGTGT ACTGGCGCAG GTGGTGGCAC AAGAAAATCC TCAAATTCAA
GCCAAAGTCG TAGATTTTAA CCAAGATGTT TATCTGCCAG AAAAATTAGC CGATATTTTG
TTCCAGGAAA TGAAGGCAAC CCCTACTGGT GAAGGTATCG TTGCTATCCG TGATGGTCAA
CGATTGAGCC GTACCCTGGC AAAAATTAAT GTACCTACAG AGAACAATTC TCTACCTTTG
TCGGCAGGAG AAACTTGGTT GATTACTGGT GGTACTAGTG CTGTCGGGAC AGAAATAGCC
TTAGCTATGG TTCGACAAGT ACCCATCAAT TTGGTGCTAA CAGGTCGCCA TCCCCTCCCC
CCCAAACAAG AATGGCAATC TGCTAGTCAT GATGCGTCTA CCCAGCAACG TATCCAGGCA
ATTCAGCAAT TAGAGCAACT CGGAGCTACA GTCATGTATC AGGCTGTGGA TGTGACGGAT
GCCTTGGGGA TGAAGCAATT AATCGAGAGC ATCAAGTCCC GCTTTGGTAA TCTGGATGGA
GTCATCCATG CGGCGGGTGC AGTTGACCAC AGCACATTTA AACTACTGCA AAAACAACCC
GCCTCAGTCA CCAAAGTTTT AGCTCCGAAA GTCCAGGGAA CCATCATCCT CGATACTGTT
ACCCGTAACG AACCCCTGAA ATACTTTGTG TTATTGTCCT CGGTTTCCGC TTCTAAAGCC
GAATGGGGAA CTGGTATGGG CGATTATGCC GCAGCCAATA CTTTTCTCGA TAGTTACGCC
ATCTACCGCA CACAGCATGG CGGTCAAGGA CGCTCCCTAG CTCTGAATTA TTCCCTATGG
AGCGATCGCG GTATGGGCGC TCTTTTAGGC GCATCAACTT TATTAATGGT AAGATCCAAA
GGTTTAAATC CTCTGGAACC AGAGCCGGCT GCTAATGCCT TTATTCAGGC GCTATCTTTG
GATGCTTCCC CTGTAATTCA CATCATTGAC TTAATTGCTC AAGCCACCCC AGAAATAGCA
CCAAAATCCT CCGCAAGCCA ATCACAAGCT AAACCTCGCA ATCTGCGACA GCTTGTCCGA
GAAGTTTTGC TGCAACATCT ACGTATTCCG GAAGCACAGG TGGAAGGACA CAAAACTTTC
CAAGAAATGG GGTTAGATTC TGTTGGCACT GTAGAAGTTG TCCAACATTT AGGGACAACT
CTGGGTGAGG AATTATTTCC GACTTTACTG TTTGAATATC AAACACCAGA TGACCTGGTA
GATTATTTAC AAAGCAAGTA CGGTTATTCT GTGAAGACTA GCACGAGTGC GATGGACTAC
GCCCCACCTT TGGTGATCGC TCCAGAAGAA ACATCTAGCC CACAAACCGA AAAATCAGCG
CCCCCAAATG TCGCTCCCCA GGAAAAATAC CAAGATGTTC CTGAACAAGA CATTGCTATC
ATCGGCATGG CTTGTAAAAT ACCAGGAGCC GATAACTTAG AACAGTATTG GGATTTACTC
AATGCAGGGC GCTCCGTCAT TCAAGATGTG CCTCAAGACC GTTGGTTTAA CCAACACTAC
TTTGAAGCCA AAGGAAACTC TCCACAAGCA AAAATATCCA AACGGGGATG CTTTGTAAAT
AGTCCCTTCG ACTTTGACCC GATGTTCTTT GGCATCTCTC CCAAGGAAGC TACGGCGATG
GACCCCCAAC AAAGGTTGTT CCTAGAGCTT TCGATGCAGG CTCTACAACA GGCAGGCTAC
GGCGGCAAAT ATCGCCCTGA TAATATCGGT GTGTTTGTTG GTTGTGGACA AAATACTTAC
ATCGAACACT TCACCAATTA TCAGTATTAC GAGGAATTAC GTCAACGTTT GCAAGAGAGT
TCCTGGTTTG ATCACCTTCC TGCTGAAGAT CGTCAGCATT TGCTCAAGAC CCTTTCACAA
GTACTGCAAC CAAGTGAAAT TCTCCCTGAG TCAGCAGCAG GTAACGAGGT CAACGAATTA
GCGGCACGAG TTAGTCATTG CCTGAACCTC AAGGGGCCAA GTATGGCAGT TAGTACTGCT
TGTTCTTCTT CCTTGGTGGC ATTACATATT GCTTGCGAAA GTCTACGCTC CGGTCAAACT
GGCATGGCGA TCGTCGGTGG GGTAAATTTA AATCTTAGTC CTAGCCCCTT TACTTTTTTA
CGTAAGGCAC AGGCTCTTTC TCTGAGTGGA ACTTGCTATC CCTTTGACCG CCGTGCTAAT
GGCATCGTTT TAGGAGAAGG TGCGGGCGTA TTAATTATCA AACCTCTCAA GCAGGCTTTG
GCAGATGGTG ACTTGATTCA TGCTGTGATT AAAGGTTCGG CAGTAAATAA TGACGGTCAC
TCCCAGGGGA TAACTGCTCC CAATCCCAAA GGTCAAGCGG AAGCTATCCG CCAAGCTTAC
AACAGTTGTG GCGTAGACCC CCGGACTATC TCCTACATTG AAACCCACGG TACAGGTACT
CTCCTGGGCG ATCCAGTAGA AGTAGAAGGG ATGACAAAAG CTTTCCGTAG CTTTACTGAT
GAAAAGGGAT TCTGTACCAT TGGTTCGGTT AAATCCTCTA TTGGTCATTT GCTGTCTGCT
TCCGGGATTG TCAGCCTGAT CAAAGTGGTA CTGGCCATGC AGCACGGCAA AATTCCCCAA
ACTGTAGGTT TTGAGGAGCC TAATCCCCAT ATCAATTTTG CAGACACACC TTTCACTGTC
GCAGGTAAGA GTATACCTTG GTCGCCTAAT GGCAACCCAT TACGTGCAGG TGTGAATGGA
TTTGGATTTG GCGGTACTAA TTGTCACGTT ATTCTTGAGG AATCCCCAGT AGCAGCTAAT
TTACAGTCCC AGGTCACAAG TTCTGCTCCT GATTTGTTAT GTCTGACGGC ACGGAATCAA
CAAGCACTTC AAGAAGTAGC TAGACAACTA CGCCAACACA TCATTCATCA TCCTGAACAA
GAATCTTCCC AAATCTGTTT TACTCAAAAT AATGCCCAGA AGGAATTACC TTACAAGGCA
GCTTTAGTAG TCAATGACCG CCAACATCTG CTCAATTACC TGGAGGCTAT ATGTTCAGCA
CAAACACCAG CAGATATATA TACAGGTCGA GCTAACCCCC AGCGTACAAC ACCGTTTCAC
TTAATATTAG ATGGCACTAG TGCGATCGCT CCCGCAGAAA TAGAAACTTT AGGCCAACGT
TTCCCCCAAT TCCAAGTAGC TTACAATAGC GTGCGTGCCG GATTCCATGA GATGAGCGAA
CAGGCACATA TATTTGCAGT GCAGTACGCT TGGGGACGCT TGTTGATGTC TTTGGAATTA
CAACCCACTA GTTTATTAGT AGAAAAAACT GGTATTCTAG CCGGAGCTAC ACTGCGGGGA
ATGTTGACAC TAGAGCAGGC GATCGCTTTG CTCCTACAAA TAGAAGGAGA AAAAGGTCTG
AGTGTGCATG ATGTGTCCGC AAAAGAACAG TCAGCATCCA CCTGGACTTG TCCCTTAGTA
ACTTCACAAG GAATTTTCAG TCATGCTGAC ACGATTTCCA CAGATCAACT GCTAGCCCTG
GTGCAAGTAT CTGAACAGTT AAATGTAGAT GTGTGTCAAG ATGTCATCTC TAAAGAAAGT
GTTTACCTAC ACTTAGGAGA TTCATTCGCT CTCAAAGAAC AATTAGCAAG TTTGGATGAA
CTGGGAGTCT GGATATATCT AAACAAAAGA CAACCAGTAG TGGAACGTGT GTTGACAAGT
CTGGCTAGGT CTTATGTAGC TGGGATCAGG TTTAATAGCA TACCCTTATT TCCCCAAGGT
CTACGTCGGG TACTGCTGCC TACTTATCCT TTCGAGCGTA AAACCTACAG AGTATCATTA
GTTGATCACA CTCAGGAAAA TCAAGCCACC TCTATACCTG CGGCTGAATT ATTACCACCA
CGCCCAGAGA GTAAGCATCA GCTAACAGTA GCCCAAACTC GACTCTTACC CATAGAACAA
CTATCTCCAC TCACAGATAA CCAACGCCAG TCAAGTTACG CCAAGCTGAC TGAGGACTTA
AAGATTGTGG ACAATCGCCA ACAGCCAAGA CTAGTGCCAA TGGAACAACT GTCCCCACTC
ACTGATAGTC AGCGCCAGTC AAGCTACGCC AAGCTGATTG AGGACTTGAA GATTGTGGAC
AATCGCCAAC AGCCAAGGCA TCCGGTAGCC GTAACCCAAA ATCGACTCTT GCCAATGGAA
CAATTGTCTC CACTCACCGA TAGCCAACGC CAGTCAAGTT ACATTAAGCT GGCTCAGGAT
TTGCAGAAGT TTGGTAAATC AGTCATTGGT CATTAG
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| Protein sequence | MSHTSDINQL SPLQRSVLAL KEMRAKLDAV ENAKTAPIAI IGMNCRFPGG ADYPEKFWEL
LHNGVDTITE VPADRWDVDE YYNANPNTLG KIYTRYGGFI KQVDQFDPHF FGLSPLEAAS
MDPQHRLLLE VGWEAIENAG QSPEELNGSQ TGVFMGLFME DYSRFNLYSG DHHRIDAYSS
LGNARSIAIG RLAYVLGLQG PVMQLDTACS SSLLAVHLAC QSLRSGECNM ALAGGVNLIL
APEASIGLSR MRALAPDGRC KTFDAKADGY VRGEGCGIVV LKRLSDAIAN NDNILAVVRG
SAVNHDGASS GLTVPNGLAQ EKLINQALTN AKVAPEQISY VETHGTGTSL GDPIEVRALG
SVLCQGRSPE QPLLIGSVKT QLGHLESAAG VASLMKVVLA LQNAEIPPHL HLQQPSPHIP
WDKLAVAVPT KPTPWPAVNG KRLAGVSSFG MSGTNAHLII EEAPELKLEL PKTERPLHLL
SLSAKTEAAL LAMASRYESF LTSHPETSLA DICFTANTGR SHFEHRLAVV AASNADLREQ
LTAFASQKQT STSVSGQVQK KRSKVVFLFT GQGSQYVEMG RQLYETQPTF RKTLDRCDEI
LRPYLQQPLL SVLYPTSDVT SPLNETAYTQ PALFALEYSL AEMWKSWGIV PDAVMGHSVG
EYVAACVAGV FSLEDGLKLI AERGRLIQSL PQNGMMAAVF TNEARMNGIL AAYTGQVAIA
GINGPENIVI SGAREAVQSV LKELATQGIN AQPLQVSHAF HSPLMASILD PFEQIASSVQ
FQAPRIPLIS NLTGQILKPN EIPHAAYWRQ HLREGVRFYA GIKTLHEQGY EIFVEMGPST
TLVGMGKRCL PEGAGTWLTS LKKGQPDWSQ LLASLSELYI RGIKINWTAF DQGYQRRRLA
LPTYPFQRQR YWVENLSPNL SPTRREALNS PPSLQGKGAG GLGFTSAIPP KALPKIPLSV
PSNWFHSWQW TPEVLSQSQD IPSGAILIFS DRHQVGENLA KLFDAKKYTT YFVTPGESFT
QTAGHFTINP ASVADYEQLI QNIKAQGVTV TAAVHLWNYS LWATSPEQLL ENDRLLNERV
YSLLFLTQAL VKHYPASPLN FLVVTQGAYP ISPNDSLHGV HQSMAGVLAQ VVAQENPQIQ
AKVVDFNQDV YLPEKLADIL FQEMKATPTG EGIVAIRDGQ RLSRTLAKIN VPTENNSLPL
SAGETWLITG GTSAVGTEIA LAMVRQVPIN LVLTGRHPLP PKQEWQSASH DASTQQRIQA
IQQLEQLGAT VMYQAVDVTD ALGMKQLIES IKSRFGNLDG VIHAAGAVDH STFKLLQKQP
ASVTKVLAPK VQGTIILDTV TRNEPLKYFV LLSSVSASKA EWGTGMGDYA AANTFLDSYA
IYRTQHGGQG RSLALNYSLW SDRGMGALLG ASTLLMVRSK GLNPLEPEPA ANAFIQALSL
DASPVIHIID LIAQATPEIA PKSSASQSQA KPRNLRQLVR EVLLQHLRIP EAQVEGHKTF
QEMGLDSVGT VEVVQHLGTT LGEELFPTLL FEYQTPDDLV DYLQSKYGYS VKTSTSAMDY
APPLVIAPEE TSSPQTEKSA PPNVAPQEKY QDVPEQDIAI IGMACKIPGA DNLEQYWDLL
NAGRSVIQDV PQDRWFNQHY FEAKGNSPQA KISKRGCFVN SPFDFDPMFF GISPKEATAM
DPQQRLFLEL SMQALQQAGY GGKYRPDNIG VFVGCGQNTY IEHFTNYQYY EELRQRLQES
SWFDHLPAED RQHLLKTLSQ VLQPSEILPE SAAGNEVNEL AARVSHCLNL KGPSMAVSTA
CSSSLVALHI ACESLRSGQT GMAIVGGVNL NLSPSPFTFL RKAQALSLSG TCYPFDRRAN
GIVLGEGAGV LIIKPLKQAL ADGDLIHAVI KGSAVNNDGH SQGITAPNPK GQAEAIRQAY
NSCGVDPRTI SYIETHGTGT LLGDPVEVEG MTKAFRSFTD EKGFCTIGSV KSSIGHLLSA
SGIVSLIKVV LAMQHGKIPQ TVGFEEPNPH INFADTPFTV AGKSIPWSPN GNPLRAGVNG
FGFGGTNCHV ILEESPVAAN LQSQVTSSAP DLLCLTARNQ QALQEVARQL RQHIIHHPEQ
ESSQICFTQN NAQKELPYKA ALVVNDRQHL LNYLEAICSA QTPADIYTGR ANPQRTTPFH
LILDGTSAIA PAEIETLGQR FPQFQVAYNS VRAGFHEMSE QAHIFAVQYA WGRLLMSLEL
QPTSLLVEKT GILAGATLRG MLTLEQAIAL LLQIEGEKGL SVHDVSAKEQ SASTWTCPLV
TSQGIFSHAD TISTDQLLAL VQVSEQLNVD VCQDVISKES VYLHLGDSFA LKEQLASLDE
LGVWIYLNKR QPVVERVLTS LARSYVAGIR FNSIPLFPQG LRRVLLPTYP FERKTYRVSL
VDHTQENQAT SIPAAELLPP RPESKHQLTV AQTRLLPIEQ LSPLTDNQRQ SSYAKLTEDL
KIVDNRQQPR LVPMEQLSPL TDSQRQSSYA KLIEDLKIVD NRQQPRHPVA VTQNRLLPME
QLSPLTDSQR QSSYIKLAQD LQKFGKSVIG H
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