Gene Ava_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3972 
Symbol 
ID3679646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4921847 
End bp4922332 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID637719324 
Producthypothetical protein 
Protein accessionYP_324472 
Protein GI75910176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000622089 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00288517 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTATCAT CACTCAACCC AAAAGCAATT GTCATCCGTC CATCAAAAAT TGTTCACAAA 
TCTTTAACTC CTCATCCTCT ATCACGATTT GTCACCGAAG AAGCAATTTG TCTGATGTTT
CGCATCGGGT TTGATGATAT CTACACAGTG GAATGTTGGC ACTATGTAGT TTACGTCCAC
GCCAGAGGGG TGAGTACATT TGTCAGTTAT GCCGATTTTC CCCCGACTTT AGGAGTGCAA
CCACCAACCA GATCAGACTT TATTAAATGG CGCAGGCGGT GGCGCAAGCA ACACGATTAT
GCTCATCGCA AACAAGCACC AGAATGGTGG GAAGAATTTT TTATTAGAGA GTTTTGGCAA
GCACCTTCCG AGTCTGTGTT ACACAGTTGG GGTGAGTTAG TCGGGATAAT TAAATTTGTG
TTTAGCGAAG ATACTTTGGC AGAACTCCGC AGAAACTATC GTCTAGAAAA ATCATCCTTA
AATTAA
 
Protein sequence
MVSSLNPKAI VIRPSKIVHK SLTPHPLSRF VTEEAICLMF RIGFDDIYTV ECWHYVVYVH 
ARGVSTFVSY ADFPPTLGVQ PPTRSDFIKW RRRWRKQHDY AHRKQAPEWW EEFFIREFWQ
APSESVLHSW GELVGIIKFV FSEDTLAELR RNYRLEKSSL N