Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3967 |
Symbol | |
ID | 3682564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4916239 |
End bp | 4917642 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637719319 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_324467 |
Protein GI | 75910171 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.177679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0198383 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG GCACCCTGTT TGATAAAGTT TGGGACTTAC ACACTGTTGG TACACTTCCT TCAGGGCTAA CACAGCTATT TATTGGCCTG CACCTAGTCC ATGAAGTTAC TAGTCCACAA GCCTTTGCTA TGTTACGGGA ACGAGGTTTA AAGGTACTAT TTCCTGAGCG GACTGTGGCT ACTGTGGATC ACATCGTGCC TACAGAGAAT CAGGCGCGTC CTTTTGTCGA TCGCTTGGCT GAGGAAATGA TCCAAGCCCT AGAGCAGAAT TGTCAAGAAA ATAACATTAC TTTTTATAAC ATTGGTTCCG GCAATCAAGG TATAGTTCAT GTGATTGCGC CAGAACTGGG ACTGACACAG CCGGGAATGA CGATCGCCTG TGGTGATAGC CACACTTCAA GTCATGGGGC GTTTGGGGCG ATCGCTTTTG GTATTGGTAC TAGCCAAGTG CGGGACGTTC TCGCCTCCCA AACCTTATCC CTATCCAAAC TCAAAGTCCG TAAAATTGAA GTTAACGGCA CACTCAACCC TGGGGTTTAT GCCAAAGATG TCATCCTGCA TATCATCCGT ACCCTGGGAG TGAAAGGTGG TGTAGGTTAC GCCTACGAAT ACGCGGGTAC GACTTTTGAG CAAATGAATA TGGAAGAACG GATGACTGTC TGCAACATGG CCATTGAGGG TGGCGCTAGA TGCGGTTATG TCAATCCTGA TCAAGTTACC TATGATTATC TCCAAGGTAG AGACTTTGCC CCCCAAGGCG CTGATTGGGA AAAAGCCGTG GCTTGGTGGG AATCAATCAA GAGTGATGCT GATGCTGAAT ACGATGATGT AATAGTATTC AACGCTGCGG ATATTCCCCC CACTGTTACC TGGGGAATTA CCCCCGGTCA AGGTATTGGT GTGAATCAGT TGATTCCCCA GCCAGAAGAA CTCCTAGAAG AAGACCGCTT TGTAGCTGAA GAAGCTTACC GTTACATGGA TTTATATCCT GGTCAACCGA TTAAGGGAAC GAAAATTGAC GTTTGCTTTA TCGGTAGCTG CACTAACGGT AGACTTAGTG ACCTGCAAGA AGCCGCGAAA ATTGCCAAAG GTCGCCACGT AGCGGAAGGA GTCAAGGCTT TTGTGGTTCC CGGTTCCGAA CGAGTGAAAA AAGCTGCCGA AGCTGAAGGT TTAGATAAAA TCTTTGAAGC AGCAGGCTTT GAATGGCGCG AACCTGGATG TTCTATGTGT CTAGCCATGA ACCCCGACAA GCTGGAAGGT AGACAAATTA GTGCTTCCTC CTCCAACCGC AACTTTAAAG GACGACAAGG ATCAGCTTCC GGTCGCACTT TGTTAATGAG TCCGGCGATG GTCGCTACTG CGGCGATTCA GGGTGAAGTT GCGGATGTGC GGGAGTTGTT GTAG
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Protein sequence | MSKGTLFDKV WDLHTVGTLP SGLTQLFIGL HLVHEVTSPQ AFAMLRERGL KVLFPERTVA TVDHIVPTEN QARPFVDRLA EEMIQALEQN CQENNITFYN IGSGNQGIVH VIAPELGLTQ PGMTIACGDS HTSSHGAFGA IAFGIGTSQV RDVLASQTLS LSKLKVRKIE VNGTLNPGVY AKDVILHIIR TLGVKGGVGY AYEYAGTTFE QMNMEERMTV CNMAIEGGAR CGYVNPDQVT YDYLQGRDFA PQGADWEKAV AWWESIKSDA DAEYDDVIVF NAADIPPTVT WGITPGQGIG VNQLIPQPEE LLEEDRFVAE EAYRYMDLYP GQPIKGTKID VCFIGSCTNG RLSDLQEAAK IAKGRHVAEG VKAFVVPGSE RVKKAAEAEG LDKIFEAAGF EWREPGCSMC LAMNPDKLEG RQISASSSNR NFKGRQGSAS GRTLLMSPAM VATAAIQGEV ADVRELL
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