Gene Ava_3953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3953 
Symbol 
ID3682550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4903837 
End bp4904589 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content49% 
IMG OID637719305 
ProductSerine O-acetyltransferase 
Protein accessionYP_324453 
Protein GI75910157 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0171272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00273394 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACAAT CCTTAGACGG TATCGAGAAT CCACCTGATT CGACACATAC ATCCTTGGTG 
AAAAATCTAC TCTCTGGCGT TTTTCTAGAG CCATTGTTGA GTGATTTTCT GATTATTTTT
GAACGCGACC CGGCGGCGCG TAATTGGCTG GAGGTAATAT TCTGTTACCC CGGACTGCAC
GCGATTTGTT TGCACCGTTT TGCTCATTGG TTGCACCGTC GTGGGGTGGT TTTCTTCCCA
CGCTTAATTT CTCACTTGGC TAGGTTTCTC ACAGGAATTG AGATTCACCC AGGTGCAGTG
ATTGGTAAAG GTGTGTTTAT CGACCACGGG ATGGGCGTTG TCATTGGTGA AACGGCGATT
GTGGGAGATT ATGCCCTAAT TTATCAAGGG GTGACTCTGG GCGGTACTGG GAAGGAAAGT
GGTAAGCGTC ATCCCACGGT TGGGGATCAT GTGGTTGTGG GTTCGGGGGC GAAGGTGTTG
GGGAATATTC AAATTGGCGA TCGCGTGCGG ATTGGCGCTG GTTCGGTTGT GTTGCGTGAT
GTTCCTCATG ATTGCACAGT TGTGGGCATT CCTGGGCGGA TTATCACCCA CAAGCCCAAG
ACTGATCTCT CTCCCCTGGA ACATGGGAAG TTACCTGATG TGGAAGCAGA TGTGATTCGT
TCTTTGCTAT CGCGCATCGA ACAATTGGAG CAAAAACTGC AAACCCTGAC AAATCAGCCG
AAGGAACCAG AACTGTTGAC GAAAGATAAG TAA
 
Protein sequence
MQQSLDGIEN PPDSTHTSLV KNLLSGVFLE PLLSDFLIIF ERDPAARNWL EVIFCYPGLH 
AICLHRFAHW LHRRGVVFFP RLISHLARFL TGIEIHPGAV IGKGVFIDHG MGVVIGETAI
VGDYALIYQG VTLGGTGKES GKRHPTVGDH VVVGSGAKVL GNIQIGDRVR IGAGSVVLRD
VPHDCTVVGI PGRIITHKPK TDLSPLEHGK LPDVEADVIR SLLSRIEQLE QKLQTLTNQP
KEPELLTKDK