Gene Ava_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3926 
Symbol 
ID3683503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4880072 
End bp4880632 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content39% 
IMG OID637719278 
Producthypothetical protein 
Protein accessionYP_324426 
Protein GI75910130 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.746975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.685888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACAGA CCCCATCCAA ACCCATCACA TTGGACGAGT TCCTGAAATT ACCAGAAACT 
GAACCCGCCA GTGAATACAT AGAAGGTAAA ATTATCCAAA AACCTATGCC GCAAGGAAAG
CACAGTGCAA TACAAAGTGA ATGTGTATCT GTTATTAATA GTGTAGTTAA ACCTCAACGT
ATCGCTCGTG CTTTTCTTGA ACTGCGTTGT ACATTTGGCG ATCATTCAAC TGTACCTGAT
ATTTCCGTCT TTATTTGGAG TCGGATTCCC CGCGAAGAGA ATGGGGAAAT TGCTAATATT
TTTCTTATTG CTCCCGATTG GACAATTGAA ATTTTATCAC CTGATCAAAG TCAGACGAAA
GTAACTAAAA ATATCCTTCA TTGTTTGAAA CATGGTACTC AAATGGGTTG GTTAATTGAC
CCCGATGAGC AAACTGTATT TGTTTACCGT CCTCAACAAG AAACTGAAGT ATTTGATGAG
CCAGATGCAC TCGTACCTGT ACCATCCTTT GCGAGTGAAC TTCATCTGAG TATTAAAGAT
TTGTTTAGTT GGTTGCTTTA G
 
Protein sequence
MVQTPSKPIT LDEFLKLPET EPASEYIEGK IIQKPMPQGK HSAIQSECVS VINSVVKPQR 
IARAFLELRC TFGDHSTVPD ISVFIWSRIP REENGEIANI FLIAPDWTIE ILSPDQSQTK
VTKNILHCLK HGTQMGWLID PDEQTVFVYR PQQETEVFDE PDALVPVPSF ASELHLSIKD
LFSWLL