Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3915 |
Symbol | |
ID | 3683492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4868874 |
End bp | 4869776 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637719267 |
Product | Fe-S cluster assembly protein NifU |
Protein accession | YP_324415 |
Protein GI | 75910119 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0694] Thioredoxin-like proteins and domains [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR02000] Fe-S cluster assembly protein NifU |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGACT ACACAGATAA AGTATTAGAA CTGTTTTACG ATCCCAAGAA TCAGGGAGTC ATTGAAGATA ACGGCGAACC TGGCGTGAAG GTTGCCACCG GTGAAGTTGG GAGTATTGCT TGCGGTGATG CGCTGAGACT GCACATCAAG GTGGAAGTAG AATCTGATAA GATTGTTGAC TCCCGCTTCC AGACCTTTGG CTGCACAAGT GCGATCGCTT CTTCTAGCGC ATTAACAGAA ATGATTAAGG GTCTGACTTT AGATGAAGCC CTGAAAGTTT CTAATAAAGA CATTGCTGAT TACCTCGGTG GCTTGCCAGA AGCCAAAATG CACTGCTCTG TGATGGGGCA AGAAGCTCTG GAAGCTGCTA TCTATAACTA TCGTGGCATT CCTCTCGCTA CTCACGATGA CGAAGATGAA GGTGCATTAG TTTGTACTTG CTTCGGTGTG AGTGAAAATA AGGTACGTCG CATAGTTATC GAAAATGACC TTACTAGTGC GGAACAGGTA ACAAATTACA TTAAAGCTGG TGGCGGTTGC GGTTCCTGTT TAGCTAAAAT TGATGATATC ATTAAAGATG TAAAGGAAAA CAAAGCCGCA ACAAACCTCA ACAATAAAGG CGGAAGTAAA CCTACAAATA TTCCTAATTC TGGGCAAAAA CGACCCCTCA CCAACGTGCA GAAGATTGCC CTCATTCAAA AAGTATTAGA CGAAGAAGTA AGACCCGTAT TGATTGCCGA CGGCGGAGAT GTAGAACTCT ACGATGTAGA CGGCGATATT GTCAAAGTAG TACTGCAAGG CGCGTGTGGC TCCTGTTCTA GTAGTACAGC CACCTTGAAA ATAGCGATTG AATCCAGATT ACGCGATCGC ATTAATCCCA GCCTAGTAGT AGAAGCAGTT TAG
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Protein sequence | MWDYTDKVLE LFYDPKNQGV IEDNGEPGVK VATGEVGSIA CGDALRLHIK VEVESDKIVD SRFQTFGCTS AIASSSALTE MIKGLTLDEA LKVSNKDIAD YLGGLPEAKM HCSVMGQEAL EAAIYNYRGI PLATHDDEDE GALVCTCFGV SENKVRRIVI ENDLTSAEQV TNYIKAGGGC GSCLAKIDDI IKDVKENKAA TNLNNKGGSK PTNIPNSGQK RPLTNVQKIA LIQKVLDEEV RPVLIADGGD VELYDVDGDI VKVVLQGACG SCSSSTATLK IAIESRLRDR INPSLVVEAV
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