| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3900 |
|---|
| Symbol | |
|---|
| ID | 3683573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4851666 |
|---|
| End bp | 4852592 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637719252 |
|---|
| Product | inosine/uridine-preferring nucleoside hydrolase |
|---|
| Protein accession | YP_324400 |
|---|
| Protein GI | 75910104 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.637254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAT TTATCATCGA TACAGATACC GCCTCAGATG ATGCTGTCGC GCTGATTATG
GCGCATCACT GGCCGGATGT GGAAATTGTG GCGGTAACAA TTGTCAATGG TAACGTCCCT
GTTGAGCAGG GAGTCAAGAA CGCTTTATAC ACAATTGAAG TATGCAGCGC CTCCACACCT
GTATATGTCG GCTGTGCCAA GCCGATGCTA CGGGAATCTC GTTATGCTGA TTGGTTTCAC
GGCAAAGATG GTATGGGTAA TATGTACTAC CCAGAAGCAA AAAGCAAGCC AGAATTAGCA
CACGCTACTG ATGCAATTAT TGAGATTATC AAACAATACC CTGGTGAAAT TACTTTGGTG
ACGCTGGGGC CGTTGACAAA TATTGCTACC GCATTGCTAA AAGCGCCGGA TATTGCCCAA
CTAGTTCAGC GTTGCGTGAT TATGGGTGGT GCAGCGAATA CAGTGGGTAA TGTGACACCT
GCGGCCGAAT ACAACATTTG GGTAGACCCG GAAGCCGCCA AGATTGTCTT TCATAGTGGA
ATGCCGATGG AGATGGTCGG TTGGGAGTTG AGCCGTCACG ATGCGGCGTT GACTTTTGCA
GAAGTAGAAA CCGTGATGAA TTTCGGCACA GACAGGGCGC GTTTAGCGAT GGAGTGTAAC
AAGACAGCTT TGGATGTTGC CATGAAAAGG CAAGGTGCTG TTGGTCTTAC CTTAGCTGAT
CCTGTAGCGA TCGCAGTTGC GCTTGATCCA GATATTGTTA CACGTCAAGG AAAATACTTT
GTAGATGTGG AAATTACGAG CGAACTAACT AGAGGTGCTA CAGTCGTTGA TGAGCTAGGA
GTGCTAAATA AAAAGCCAAA TATGAATGTA ATTTGGGCAA TAAATGTGAT GCGATGGAAA
GAAATTTTGT ATTTTTGTTT ACACTAG
|
|---|
| Protein sequence | MRKFIIDTDT ASDDAVALIM AHHWPDVEIV AVTIVNGNVP VEQGVKNALY TIEVCSASTP
VYVGCAKPML RESRYADWFH GKDGMGNMYY PEAKSKPELA HATDAIIEII KQYPGEITLV
TLGPLTNIAT ALLKAPDIAQ LVQRCVIMGG AANTVGNVTP AAEYNIWVDP EAAKIVFHSG
MPMEMVGWEL SRHDAALTFA EVETVMNFGT DRARLAMECN KTALDVAMKR QGAVGLTLAD
PVAIAVALDP DIVTRQGKYF VDVEITSELT RGATVVDELG VLNKKPNMNV IWAINVMRWK
EILYFCLH
|
|---|
| |