| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3880 |
|---|
| Symbol | gidB |
|---|
| ID | 3683611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4835055 |
|---|
| End bp | 4835792 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637719232 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_324380 |
|---|
| Protein GI | 75910084 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.480171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACT TATTGCCAGA AATGGCTGAA ATTTGGCAGC AAACTCTTAA TTGGCAACCA
ACAGACTCTC AACAGGCGCG ATTTCAGCAG CTTTATGAGT TAATTCTGGA AGGTAATCGC
CAGTTAAATT TAACTCGCAT TACTGAACCG CAGGAATTTT GGGAAAAACA TCTTTGGGAT
TCACTGCGAG GAGTTGCACC ACAGCAACAA TTAATCTCGT TTCTGCCAGT GGGTGCATCT
GTCATTGATA TTGGTACTGG TGCTGGGTTT CCTGGTGTTC CTGTGGCAAT TATCGCCCCT
AATTCTACAA TGACGCTGGT GGATTCAACG CGCAAAAAGA TTGCTTTTAT CGAATCAATC
TTGAAGGAAC TTGGCCTGAC TAATGCCAAA ACGTTGGTTA GTAGGGCGGA AGAAATTGGT
CAACAACCAC AGCATCGAGA ACAATATGAT GTTGCTCTAA TTCGTGCGGT TGGCACTGCT
TCGGCTTGTG CAGAATATAC TTTACCTTTA CTAAAGTTAG GTGGTTTGGC TGTAATTTAT
CGTGGTACTT GGACTGAAGA AGAAACTACA TCTTTGGAAA ATGCAGTGCG GCAGTTAGGT
GGCACAGTTG AATTAATAGA CAACTTTACT ACCCCCTTAA CTAACAGCGT TCGGCACTGT
CTTTACTTAC GGAAGGTAGC TAAAACACCA GCTAATTTTC CTCGTGCTGT TGGTGTACCG
ACTCAAAAGC CTATTTAG
|
|---|
| Protein sequence | MTNLLPEMAE IWQQTLNWQP TDSQQARFQQ LYELILEGNR QLNLTRITEP QEFWEKHLWD
SLRGVAPQQQ LISFLPVGAS VIDIGTGAGF PGVPVAIIAP NSTMTLVDST RKKIAFIESI
LKELGLTNAK TLVSRAEEIG QQPQHREQYD VALIRAVGTA SACAEYTLPL LKLGGLAVIY
RGTWTEEETT SLENAVRQLG GTVELIDNFT TPLTNSVRHC LYLRKVAKTP ANFPRAVGVP
TQKPI
|
|---|
| |