Gene Ava_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3875 
Symbol 
ID3683606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4828719 
End bp4829660 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content39% 
IMG OID637719227 
Productglycosyl transferase family protein 
Protein accessionYP_324375 
Protein GI75910079 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0296583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA AAGTTCCCGT TTCTGTACTC ATTCCCGCCA AAAATGAACA GGCAAATCTG 
CCAGCCTGTC TTGATAGCCT ACAAAGAGCA GATGAGATAT TTATTGTAGA TTCTCAAAGT
ACTGATAAGA GCATTGAAAT TGCCAAAAAC TATGGTGCAA ATCTAGTACA GTTCTACTTT
AATGGACGCT GGCCGAAAAA GAAGAATTGG TCTTTAGATA ACCTGCCATT TCGCAACGAG
TGGGTATTAA TTGTAGATTG CGATGAGCGT ATTCCTAATG AATTGTGGGA TGAAATTGCC
CAAGTAATCA AAACAGAAGA ATATACAGGT TACTATCTCA ATCGTCGTGT ATTTTTCTTA
GGTAAGTGGA TTCGCTATGG TGGCAAGTAT CCTGATTGGA ATCTGCGGTT ATTTAAGCAT
AAATTAGGTC GTTACGAAAA TCTGCATACC GAAGATGTAG CAAATACTGG TGATAACGAA
GTTCATGAAC ACGTTGTTAT GCAGGGTAAA GTTGGTTATC TCAAAGAAGA TATGCTCCAT
GAAGATTTCC GCGATATTTA CCACTGGTTA GAAAGACACA ATCGTTATTC CAACTGGGAA
GCTCGCGTTT ATTACAACCT GATTACAGGT CAAGATGATA GGGATACTAT TGGAGCCAAT
TTATTTGGTG AAGCCGTACA ACGCAAGCGC TTTCTCAAGA GAGTCTGGGT ACGTCTGCCA
TTTAAGCCAC TCTTAAGGTT TATTTTGTTC TACGTTATTC GCTTAGGTTT TTTAGATGGT
CGAGCCGGAT ATATTTATGG CAGGCTACTC AGTCAATATG AATATCAAAT TGGCGTTAAA
CTCTACGAAT TACGCAATTG TGGTGGTACA TTAAATACGG CAAATACTTC TAATTCTATC
CCGCCATCTC TCACCCAAGA AATCGAGAAA TCTACAACTT AG
 
Protein sequence
MSAKVPVSVL IPAKNEQANL PACLDSLQRA DEIFIVDSQS TDKSIEIAKN YGANLVQFYF 
NGRWPKKKNW SLDNLPFRNE WVLIVDCDER IPNELWDEIA QVIKTEEYTG YYLNRRVFFL
GKWIRYGGKY PDWNLRLFKH KLGRYENLHT EDVANTGDNE VHEHVVMQGK VGYLKEDMLH
EDFRDIYHWL ERHNRYSNWE ARVYYNLITG QDDRDTIGAN LFGEAVQRKR FLKRVWVRLP
FKPLLRFILF YVIRLGFLDG RAGYIYGRLL SQYEYQIGVK LYELRNCGGT LNTANTSNSI
PPSLTQEIEK STT