| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3868 |
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| Symbol | |
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| ID | 3678508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4817864 |
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| End bp | 4820929 |
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| Gene Length | 3066 bp |
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| Protein Length | 1021 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719220 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_324368 |
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| Protein GI | 75910072 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTTTA CGCGTGGCAA AGTGTACAAA AATCATCTTG ATCTTCAGAA AAACAAAGGT
TTTCCAACGC CAACAAAAGA TTCTATCAGT GAATGCGAGG CTGGGAATTC AGACTTTACA
CCAGAATTTC AGTCTTATGA AAAGTCCATA TTAGACTTGC AAGAAATAAT TAATTTATTA
GCTGAAATCA ACCCATTTCC TGTAGCAATT ATTGGTTTAG AAAGCCATCA AATTTTATTT
AAAAATAAGC TGGTTGATAA CCCGGTATTG CAGCAACTAA TTCCCGATTT TTTAGCTGAT
TCAGATTTAT GGACTCAGTT AAATAGCAAA TTAGTAAATG GCAATTTTAT TAGAAAATTG
GCGCTAGAAA TCAAAAGCAG CAATGAAAAC CGTTTTTTAG CTATAATTTC TGGAAAATTG
GTTAATTATG AGCATGAACG GGCAGCATTC TTGGTATTTA CAGATGTAAA TACCGTCATA
GGAGCCAGTG AGGAACAACA AAAAGATACA TTAGAAAAAC CAGAACTTAG CAATTTAATC
ACTGATACGA GTGATAGCCA GCGACTACCT ACGATAAAAC ATAGTCCATG GCCGGCTCCC
TCACATTTGA TGGAACAGGC GTTAGCTGCT ATCAGTAATG GCATTGTGTT GACAGATGCC
AATCAACCAG ACAATCCAAT TATCTATGTA AATCAAGCTT TTGAAGCCAT GACTGGCTAC
TCGGCTGGTG AAGTTATTGG ACAAAACTGC CGATTTTTAC AAGCTAATGA AACAGACCAG
CTCAGCCTTA GCGAGTTACG TTCTGCCCTC CAAGAAAAAA AAGAATGCCA TGTCGTCATC
AAAAATTTCC GCAAAGATGG CACCGAATTT TGGAATGAAC TTTATATTGC ACCTGTATTT
GATAGTTGTG GGCAGTTAAC TCATTTTATC GGTGTTCAAA ATGATATAAC TCATCACCTA
CAGGCATTAG AGACATTACA AGAGCAAAAA GAACAGTATC GTCGCATTGT AGAAACGGCC
AGTGAGGGAA TTTGGCTACT CAATGAAAAT AACGAAACTA CCTTCGTCAA TCAACAGATG
GCGAGTATGT TGGGTTACAC CATTGAAGAA ATGCTCGGTG CCAGCTTGTT TTCCTTTATG
GATGCCGAAG GTTTGGATAT AGCTCAAGAC TTACTATTAG GCCGTCAGCA AGACATTCAG
GAGAAACACA ACTTTAAATT CCGTTGCAAA GATGGCTCAG ACTTATGGGC AATTCTTTCC
TGTACGCCAT TCTTAGATGA GCAAGGAAAC TATACTGGCG CGTTGGGAAT GTTAACTAAT
ATTAGCGATG TCTACGACGA ACTGCGCTTA CGCAAACAAG CAGAAGCTTC ATTGCAAGAA
AGCAAAGAAC GTTTAGACGG AATTTTAAAT TCCCTGGAAG TTGTAATCTG GTCAATTGCC
GCCGATACTT TTGAGATGCT TTATCTCAAT TCTGCCGTAG TTCAAGTTTA CGGTCGTTCT
GTTTGTGAAT TTTACGATAA TTCAAAGCTG TGGTTTGAGT TAATTCACCC AGAAGACCAG
CAAAGGGTGA GTCAATCAAT TAAACCATTA CTGGCAAATG GTAGCCACGA ATTAGAATAC
AGAATCCTCC GGCAAGATGG ACAGGTACGC TGGCTTTATA ACCACAGTCA TGTGATTTAT
GACGCTGTTG GTCAGCCAAT TCGTATTGAA GGTGTTGCTA CGGATATTAC TGAGCGGAAA
AACATGGAAG AGCGGCTAGT CTACCATGCT TTTTACGATG ATCTGACTGG ATTGCCCAAC
CGAGTTTTAT TTATGGATCG GTTAGCGCAA ACCATCAACC AAGCCAAAGA ATCCCCGAAT
GATCTATTTG CCGTACTATT TTTGGATCTT GACCGTTTTA AAGTTGTGAA TGATAGTTTG
AGTCACTTAG TGGGTGACCA GCTACTAGTG AGTTTTGCCC AACGCTTACA AAGTTGCTTA
CAGCCAGAAG ATACTCTGGC TCGTTTGGGT GGAGATGAGT TCACAATTTT ACTATCTCAC
ATTCAATCTA TCGACGATGC AACCCGTATA GCCGAAAAGA TTCATCAGGC ACTCAAGTTA
CCATTTAACT TGAGCGGATA TGAAGTATTT ACAACTGTCA GCATTGGCAT TGCTTTAAGC
TCAAATGATT ATGTCCAAGC CGCAGATTTG CTGCGAGACG CTGATACTGC GCTTTACTGC
GCTAAGGAGC AAGGTAAAGC TTGGCACATA GTATTTGATT CTACTATGTA TGACCGAGCT
GTAGCTCTGT TGCAGTTAGA AACTGATTTG CGTTGGGCGA TCGCCAGGCA AGAGTTGTAT
GTTGTTTACC AACCCATTGT CTCAGTAGCC ACAGGTAAAA TTACCGGATT TGAAGCACTA
GTTCGCTGGG AACACCCAGA AAGAGGACTA ATTTCACCAG TCGAGTTTAT TCCTGTAGCC
GAAGAAACAG GACTGATTAT TCAGATTGGT CAGTTTGTTT TGCGGGAATC TTGCCAACAA
TTAAAACAAT GGCATTTAGA GTTTCCTGAG TTTCAGCATT TGAGTATCAA CGTCAATCTT
TCCGGTAAAC AGTTTTCCCA ACCATATTTA GTTGAAGAGA TTGAGCAACT GTTACAAGAA
TTTGAGCTAG ACGCTAACAG CATCAAGTTA GAAATTACCG AAAGCGCCAT TATGGCTAGT
CCTGAACAAG CTGCTACCAT TCTTCAACAA CTAAAAACTT TAGGGATTCA GTTGTGTATT
GATGACTTTG GTACAGGTTA TTCATCTTTA GCTTATTTAC ATTGTTTCCC CATTGATATT
TTAAAAATTG ACCGTTCTTT TACGAAGCGA ATTGATAGCG ATAGTGAGCA ATTGGCAATT
ATCCGTGCTA TTGTCACACT TGCCAGTAAC TTGGAAATGA GTGTAGTGGC TGAAGGTGTA
GAAACAGTCA ACCAGTTGGT ACAATTACAG TTATTAAAAT GTGACCAAGC CCAAGGGTAT
TTGTTCTCAA AACCCTTAAG TAGCGACAAA GTTAGCTTGT TATTAGCTGC AAAAACACAA
TATTAG
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| Protein sequence | MVFTRGKVYK NHLDLQKNKG FPTPTKDSIS ECEAGNSDFT PEFQSYEKSI LDLQEIINLL
AEINPFPVAI IGLESHQILF KNKLVDNPVL QQLIPDFLAD SDLWTQLNSK LVNGNFIRKL
ALEIKSSNEN RFLAIISGKL VNYEHERAAF LVFTDVNTVI GASEEQQKDT LEKPELSNLI
TDTSDSQRLP TIKHSPWPAP SHLMEQALAA ISNGIVLTDA NQPDNPIIYV NQAFEAMTGY
SAGEVIGQNC RFLQANETDQ LSLSELRSAL QEKKECHVVI KNFRKDGTEF WNELYIAPVF
DSCGQLTHFI GVQNDITHHL QALETLQEQK EQYRRIVETA SEGIWLLNEN NETTFVNQQM
ASMLGYTIEE MLGASLFSFM DAEGLDIAQD LLLGRQQDIQ EKHNFKFRCK DGSDLWAILS
CTPFLDEQGN YTGALGMLTN ISDVYDELRL RKQAEASLQE SKERLDGILN SLEVVIWSIA
ADTFEMLYLN SAVVQVYGRS VCEFYDNSKL WFELIHPEDQ QRVSQSIKPL LANGSHELEY
RILRQDGQVR WLYNHSHVIY DAVGQPIRIE GVATDITERK NMEERLVYHA FYDDLTGLPN
RVLFMDRLAQ TINQAKESPN DLFAVLFLDL DRFKVVNDSL SHLVGDQLLV SFAQRLQSCL
QPEDTLARLG GDEFTILLSH IQSIDDATRI AEKIHQALKL PFNLSGYEVF TTVSIGIALS
SNDYVQAADL LRDADTALYC AKEQGKAWHI VFDSTMYDRA VALLQLETDL RWAIARQELY
VVYQPIVSVA TGKITGFEAL VRWEHPERGL ISPVEFIPVA EETGLIIQIG QFVLRESCQQ
LKQWHLEFPE FQHLSINVNL SGKQFSQPYL VEEIEQLLQE FELDANSIKL EITESAIMAS
PEQAATILQQ LKTLGIQLCI DDFGTGYSSL AYLHCFPIDI LKIDRSFTKR IDSDSEQLAI
IRAIVTLASN LEMSVVAEGV ETVNQLVQLQ LLKCDQAQGY LFSKPLSSDK VSLLLAAKTQ
Y
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