| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3854 |
|---|
| Symbol | |
|---|
| ID | 3678494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4797486 |
|---|
| End bp | 4798646 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637719206 |
|---|
| Product | response regulator receiver Signal transduction histidine kinase |
|---|
| Protein accession | YP_324354 |
|---|
| Protein GI | 75910058 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGAC ACTCAGTCAG GATTTTATTA ATTGAGGATA GCCTCGCAGA AGCTAGGTTA
TTACAGGAAT ATTTGCATCA AGCTGAGTCC AAACAATTTG TTCTGGTTCA TGTGACGCGA
TTACAGGAAG CACTCAATGA ACTCAAACAG ACCAGCTACG ATGTGATTTT GTTAGACCTC
ACCCTACCGG ATAGCCAAGG ATTATCATCT TTACCCAGAT TAATAGGACT CGCTCCCAGC
GTACCAATTG TTGTCTTAAC AAATACTAAC GATGAAGACT TAGCAATTGA AGCAGTCAGA
CAGGGAGCGC AAGATTATTT AGTTAAGCGA CAGGTAAATG TTCATGTTTT GGTTCGTGCT
GTATGTTATG CAATCGAGCG TAAGCAAGCA TTAGAAACAT TACGCACCAT GAATACAACC
TTAGAAAACC GGGTGGAAGA ACGCACGGCT GAATTGGTAA AAGCGCAGGA AATTAACCAG
TTTAAATCTG AGTTTGTTTC TATGCTCTCC CATGACATTC GTAATCCCTT GAATACTATT
TTGCTAGCTG CTGGGTTGTT GCAAAACAAT GAAGACAAAT TAACCCAAGA GAAAAAACGT
TCTCATTTAC AAATGATTCG TTCCGCCATT AAAAATATGG CACAGCTATT AGATGAAGTA
TCATTAATAG GTAAAGCTGA ATCAGGTAAA CTCCAGTGTG AACTTATCGC TATAGATTTG
GAAGCATTCT GTCGTCAGTT ATTAGCAGAA GCGCAATTAA CTATAGGCGA GAAGCAGCTG
ACTGTAATTT TTACCTGTAA TAAAAAATTT GATGAAGCCT TATTAGATGA AACCTTGTTG
CGTCACATTT TAGGTAATGT ATTAGGCAAC GCTATTAAAT ATTCCCTTCC CGGTGGTATG
ATCCACTTTG AATTGACTGC TAACAATAAT GCAGTCATGT TTAAAATTCA AGATTGCGGC
ATTGGTATTT CTCCCCAAGA TCAAAAGAAT TTATTTCAAT CATTCCATCG TGGGGAAAAT
GTAGGAGGAA TAGCAGGTAC TGGTTTAGGG CTAGCTATTG TTAAAAAATG TGTTGATGCT
CACGGTGGTG AAATTATCGT TAATAGTGAG GTTGGGGTTG GTACAACCTT TACTATCATC
TTGCCATTAA TCAACTTTTA A
|
|---|
| Protein sequence | MVGHSVRILL IEDSLAEARL LQEYLHQAES KQFVLVHVTR LQEALNELKQ TSYDVILLDL
TLPDSQGLSS LPRLIGLAPS VPIVVLTNTN DEDLAIEAVR QGAQDYLVKR QVNVHVLVRA
VCYAIERKQA LETLRTMNTT LENRVEERTA ELVKAQEINQ FKSEFVSMLS HDIRNPLNTI
LLAAGLLQNN EDKLTQEKKR SHLQMIRSAI KNMAQLLDEV SLIGKAESGK LQCELIAIDL
EAFCRQLLAE AQLTIGEKQL TVIFTCNKKF DEALLDETLL RHILGNVLGN AIKYSLPGGM
IHFELTANNN AVMFKIQDCG IGISPQDQKN LFQSFHRGEN VGGIAGTGLG LAIVKKCVDA
HGGEIIVNSE VGVGTTFTII LPLINF
|
|---|
| |