Gene Ava_3575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3575 
Symbol 
ID3679521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4453915 
End bp4454583 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID637718926 
Productcytochrome c oxidase subunit III 
Protein accessionYP_324076 
Protein GI75909780 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.515089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0102703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTG GCGTAATTCA TGTAGATGAA AGTCCTATCC CTTTAGAACG ATGGTGGCGA 
TACCTACCCA ATTGGCTAAA GCGTTTCCTA CCAGTTCGTG GCGGACGTGC TGAAGACCAT
CATGGCAAAG CAATTTTCGG GTTTACCGTG TTCCTGTTGT CGGAAAGCAT AGTTTTTTTG
AGCTTTATCT TTACATATAT TGCTTTGCGG TTAACGCACT TAGGAAATTG GCTTCCACCT
GGTGTTTCGG GCCCAGAATT GTCTACTCTT GTGATTATTA ATACGGTGGT ATTGCTGTCT
AGTAGCTTCG TTATTCAACC AGCCGAAAAT GCTCTCAAGC ATCATCAGCT AAATAAATTC
CGTTGGCTAT GGTTGATGAC GATTTGTATG GGAACTTATT TCTTAATCGG TCAAGGAATT
GAGTGGAGTA AGCTTGATTT TAGGTTAAGC ACAGGATTAG TTGGTTCTAC ATTTTATGTA
TTAACAGGTT TTCATGGCCT GCACGTTCTC AGTGGTGTGA TTTTGCAAAT AACCATGCTT
GTTTTTTCTT TCCGGCAAGG CAACTATGAT CAAGGTCACT TCGGTGTAAG TGCTACCACA
TTGTTTTGGC ATTTTGTTGA TATAGTTTGG GTATTTTTAT TCTCACTTCT CTATCTTTGG
CAGGCATAA
 
Protein sequence
MNRGVIHVDE SPIPLERWWR YLPNWLKRFL PVRGGRAEDH HGKAIFGFTV FLLSESIVFL 
SFIFTYIALR LTHLGNWLPP GVSGPELSTL VIINTVVLLS SSFVIQPAEN ALKHHQLNKF
RWLWLMTICM GTYFLIGQGI EWSKLDFRLS TGLVGSTFYV LTGFHGLHVL SGVILQITML
VFSFRQGNYD QGHFGVSATT LFWHFVDIVW VFLFSLLYLW QA