Gene Ava_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3574 
Symbol 
ID3679520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4452424 
End bp4453791 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content41% 
IMG OID637718925 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_324075 
Protein GI75909779 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.907786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.012641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC CAATATATCA AACTGTGATT GTCGGCGGTG GTTTTACCGG ACTATTTACA 
GCGTTACACC TAGCACATGA ACATTATCCT CGTTCTGTGA TTTTGATTGA TAGAAATGAG
CGCTTTTGCT TTAAGCCGCT ACTATATGAA TATTTCGATA ACGAAATGGA TAGCTTTCAA
GTAGTACCGC GTTTTTCGGA ATTGCTTAAA GGTAGTGGTG TCATCTTTGT GCAAGATACT
GTACAGACGA TAGACTTACA TCAACGGGAA GTTAAATTAG CGTCGGGTAA TTCCTACAGT
TACAGCAACT TAGTATTAGC TTTAGGTAGT GTTACTGGCT ATCATCATAT TGAAGGTGCG
AATATTAATG CTTTTCCTTT CTGGACGCAA GCAGATGCGA TCGCACTTGA CAGACATTTA
CGTGACTGTT TACAAAAAGC CATCCAAACT GAAGATATAA AACAACGCCG CCAACTATTA
ACAGTAGTTG TAGTTGGTGG TGGCGCTTCT GGTGTGGAAA TGGCAGCAAC TTTAGCTGAT
TTTCTCCCAC ATTGGTATGC TGCTTTGGGT GGTAACTCTG AGGAAATCCG TGTGATTCTA
CTCAATCATG GTCAAAAAAT TCTTGATGGC GATATTAACG ATCCTTTGCG TCCAATTGCT
GAAAAAGAAT TACAAAAACG TAGCGTAGCA ATAGAAATTA TTACAGAAGC AGAAGCTACT
GCTGTGCATC CAAATGCAGT TGAATATAAA AGTCATGGTG AAATTAAGAC ACTGACAACA
CATACCACAA TCTGGACTGC TGGTACTTCT ATCCATCCCC TAATTCAAGA GTTACCAATT
CCCCAAGAAC ATCGAGATCA TCACAGCCGT CCCCTAGTCA CTTCCACTAT GCAATTTCTC
GATTTTCCAG AAGTTTTTGC AGGTGGTGAT TGTGCAGCAG TTCAGGATAG TTTCCTACCG
CCTACAGCCC AAGTCGCTTA TCAACAAGGA GCAAATATAG CTCATAATTT GAAAGCACTT
GCACTAGGAG AAGAACTCGA ACCTGCTAAG GTGAACATTC GAGGAACTCT ATTGAAGTTG
GGGTTAAATG ATGCTGCTGC TAACTTATTC AATGTTTTTG AAGTTGTAGG CGAACCCGCA
CACTTAATCC GTCAAGGCAC TTATTTAACA CTATTACCAA CACCAATTCA TGACTTTCAA
GCCACAACGG AATGGGTGGA TGAAGAGATT TTTCATCACC ACCTAGACCC TCACGATGTA
GGTAAAAAAG TTGTACAAGC AGTGGAGGTG GTTGGTGCCG GAATTGTTAG TGTTTTAGTA
GGGAGGAAGC TATTAAAAAT GTTAGGTGAT GACGAGAAAG TTAAATAA
 
Protein sequence
MNSPIYQTVI VGGGFTGLFT ALHLAHEHYP RSVILIDRNE RFCFKPLLYE YFDNEMDSFQ 
VVPRFSELLK GSGVIFVQDT VQTIDLHQRE VKLASGNSYS YSNLVLALGS VTGYHHIEGA
NINAFPFWTQ ADAIALDRHL RDCLQKAIQT EDIKQRRQLL TVVVVGGGAS GVEMAATLAD
FLPHWYAALG GNSEEIRVIL LNHGQKILDG DINDPLRPIA EKELQKRSVA IEIITEAEAT
AVHPNAVEYK SHGEIKTLTT HTTIWTAGTS IHPLIQELPI PQEHRDHHSR PLVTSTMQFL
DFPEVFAGGD CAAVQDSFLP PTAQVAYQQG ANIAHNLKAL ALGEELEPAK VNIRGTLLKL
GLNDAAANLF NVFEVVGEPA HLIRQGTYLT LLPTPIHDFQ ATTEWVDEEI FHHHLDPHDV
GKKVVQAVEV VGAGIVSVLV GRKLLKMLGD DEKVK