Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3565 |
Symbol | |
ID | 3679511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4437460 |
End bp | 4440207 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718916 |
Product | ATPase, E1-E2 type |
Protein accession | YP_324066 |
Protein GI | 75909770 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0337508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0971455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAAG CTGTAGCTAC CGTTGCACCA GGAGAGAAAC AGCCTACTGT TTGGCATTCC TTAGAGATAT CCGAAGCGAT CGCCCGTTTG CAAACTGATG CAGAGATAGG TTTAAGTAGC AACCAAGCAC AACACCTATT AACTAGTGGC GGTGCGAATG AACTAACGGG AAAAAAAGGT AAGCCTTGGT GGTTGAAGTT TCTGTTGCAA TTTAACCAGC CGCTATTAAT TATTTTGTTG TGTGCAGGTT TGGTCAAAGC GTTGAGTGGT AGCCTTGTCA ACGCTGGGGT AATTTGGGGA GTTACCACCA CCAACGCCAT TATCGGATTT ATTCAAGAAG CAAAAGCCGA AAGTGCGATC GCAGCTTTAG CCAAAGCCAT CACCACAGAA GCCACCATCA TCCGCGATGG GCAGAAAATC CGCATCCCCT CACGGGAATT AGTTCCTGGT GATGTGGTGC TGTTGACTTC CGGCGATAAA GTCCCCGCCG ACTTACGCCT CATTCAAGTG CGGAACTTGC AAATTGATGA GTCTGGCTTG ACTGGGGAAT CTGTGGCGGT AGAAAAACAT ACACAGGTTT TAACGCCAGA TACAGGATTA GGCGAACGGA AAAACATGGC CTATGCAGGG GGCTTTGTCA CCTTCGGACA AGGGACTGGT GTAGTTGTTG CTACAGGAAA TAACACGGAA ACAGGGAAGA TTTCCCAGTT AATGGAGCAG CATACAGATA TTTCCACACC ATTAACGCGG AAATTTAACA AATTTAGCCA GAATTGGCTA TACATGGTCT TAGGGCTAGC TACACTCTGC TTTGTTGTCG GGTTAAGCTT TCGGGGCTTT AACGAAGCCT TAGAAGCAGC CGTAACTTTA ACAGTCAGCG CCATACCGGA AGGATTACCA GCAGTAGTAA CTGTTACTTT AGCGATTGGT GTTTCCCGCA TGGCTAAAAG GAATGCCATT ATTCGCAAAT TACCGGCGGT GGAAACCTTG GGTAGTGCAA CTGTGATTTG TTCCGATAAA ACCGGGACAT TGACAGAAAA CCAGATGACA GTCCAAGCCA TCTATGCGGG AGGACATCAA TATACAGTTA GTGGTGTGGG TTATGCGCCC GATGGGGAAA TCCTCAGAGA TGAGCAACCT GTAGATTTAA ATAGAGAGAA GGGACTACAA GAATGTTTAA TAGCTGGATT ACTTTGTAAC GATTCCCACT TAGAAACGAA AAATGGTAGG TGGGTAGTGC TGGGAGATCC CACAGAAGGG GCGTTAATTG CATCAGCGAA TAAAGCCAAT TTTAGCCAGC CCACCTTACT CAAGCAAATG CCCAGGCTAG ATGGGATTCC CTTTGAATCA GATTATCAAT ACATGGCAAC CTTGCACAAC ACACCCACCG GCAAGGTGAT TTATGTCAAA GGTTCTGTAG AAGCGATTCT CCAACGCTGT AGCCTGATGT TAAATACCGA TGGACAACCC CGTCCCTTGG ATTGTGTAGA AACCTTAAAA CAAACCACCA TTGAACGGGA AGTCAACATC ATGGCGCGCC AAGGCTTACG GGTGTTAGCC TTAGCCAAAA AGCTTGTAGG AAATGAGCAA AATGACGTAG ATCATGCAGA TATCGCTGAT GGGTTAATTT TCATTGGCTT ACAGGGGATG ATTGATCCTC CCCGTGAGAG TGCAATCAAA GCGGTGCAAG CCTGTCAAAC CGCCGGAATT CAGGTGAAGA TGATCACAGG AGATCATGCT ATCACAGCCC AGGCGATCGC TCGTCGTATG GGCATCAACA AAAACGGCTC AGTTCTCGCT TTCACAGGTG CAGAACTCGC CAAAATGGAT AAAACCGAAC TCGCTCAAGT CGCGGAAGAA GGTGTAGTCT TTGCCCGCGT TGCACCAGAA CAAAAACTGC GTCTAGTCGA AGCCTTACAA TCAAAAGGCG AAGTCGTCGC CATGACTGGG GATGGTGTTA ACGATGCACC CGCCTTAAAA CAAGCAGACA TCGGAATTGC AATGGGTGGC GCAGGTACAG AAGTCGCCAA AGAAGCCTCA GATATGCTAC TCACCGATGA TAATTTTGCC TCCATTGAAG CAGCTGTAGA AGAAGGACGA GCAGTTTATA AAAACCTCTT GAAAGCAATC TGCTTTATTC TCCCTGTCAA CGGTGGGGAA TCAATGACAA TTTTAATTAG TACATTATTG GCTAGAGACT TACCAATTTT ATCTCTACAA GTCCTCTGGT TAAATATGTT GAACTCCATC ACCATGACAG TACCTTTGGC ATTTGAACCC AAAGGACAAA ATGTGATGCA GCAAGCACCC CGTCACCCCA ACGAACCCTT ACTATCAGGT AGTCGCATAC AACGAATTCT CGCAATTTCT CTGTTTAACT GGATTGTTAT CTTCGGGGTT TTTGAATACA TCCGCCAAAC CACAGGCAAT ATAGATTTAG CCAGAACAAT GGCGATTAAC TCTCTGATTG CAGGACGAAT ATTTTATCTG TTGAGTATTA GCCAATTAAT CCCCAATCTC ATTGCCAAAA TGGACGGCAC AATGAAAGAG AATGTAGATA TTCCCGCCAT TGGATTTGGT ATTTTGGGTG CAATTCTCCT ACAAATTGTC TTTGCTCATG TGCCATTGAT TAATGATGTA TTTGAAACAG CACCCTTAAG CTTACAACAA TGGTTATTCT GTTTGGGTGT CGGTTCTCCG ATGATTTTAT GGGCGACATT GGTAAATCGT TTAGATCCAC CCAATTAA
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Protein sequence | MVQAVATVAP GEKQPTVWHS LEISEAIARL QTDAEIGLSS NQAQHLLTSG GANELTGKKG KPWWLKFLLQ FNQPLLIILL CAGLVKALSG SLVNAGVIWG VTTTNAIIGF IQEAKAESAI AALAKAITTE ATIIRDGQKI RIPSRELVPG DVVLLTSGDK VPADLRLIQV RNLQIDESGL TGESVAVEKH TQVLTPDTGL GERKNMAYAG GFVTFGQGTG VVVATGNNTE TGKISQLMEQ HTDISTPLTR KFNKFSQNWL YMVLGLATLC FVVGLSFRGF NEALEAAVTL TVSAIPEGLP AVVTVTLAIG VSRMAKRNAI IRKLPAVETL GSATVICSDK TGTLTENQMT VQAIYAGGHQ YTVSGVGYAP DGEILRDEQP VDLNREKGLQ ECLIAGLLCN DSHLETKNGR WVVLGDPTEG ALIASANKAN FSQPTLLKQM PRLDGIPFES DYQYMATLHN TPTGKVIYVK GSVEAILQRC SLMLNTDGQP RPLDCVETLK QTTIEREVNI MARQGLRVLA LAKKLVGNEQ NDVDHADIAD GLIFIGLQGM IDPPRESAIK AVQACQTAGI QVKMITGDHA ITAQAIARRM GINKNGSVLA FTGAELAKMD KTELAQVAEE GVVFARVAPE QKLRLVEALQ SKGEVVAMTG DGVNDAPALK QADIGIAMGG AGTEVAKEAS DMLLTDDNFA SIEAAVEEGR AVYKNLLKAI CFILPVNGGE SMTILISTLL ARDLPILSLQ VLWLNMLNSI TMTVPLAFEP KGQNVMQQAP RHPNEPLLSG SRIQRILAIS LFNWIVIFGV FEYIRQTTGN IDLARTMAIN SLIAGRIFYL LSISQLIPNL IAKMDGTMKE NVDIPAIGFG ILGAILLQIV FAHVPLINDV FETAPLSLQQ WLFCLGVGSP MILWATLVNR LDPPN
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