Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3542 |
Symbol | |
ID | 3679566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4410588 |
End bp | 4411982 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718894 |
Product | PAS/PAC sensor Signal transduction histidine kinase |
Protein accession | YP_324044 |
Protein GI | 75909748 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.743078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATTG TTAACTGTAA TTCGTTTGCT GGTACATCAA AGGCACAGAG AGTGGATGAA ACTGTAAAAG CACGACATCA ACAAGATCAA CAACAGCTAA TTAATCGCTT GCAGGCTACT GAAGCACAAT ATCAAGCTAT ATTAAACGCT ATTCCTGATT TTATCTTTCG CCTCAGCCGT GATGGTAATT TTTTATCTTT GAACGGAGAA GTTGCAAATC TCCCTTGCCC TGGGGAAGAG TTCACTGGTA AAAATATCCA AAATGTCTTA CCAACTGATA TTGCCACGAT GATTCAAGGA ATCATTACTA AAACTTTGGA TACAGGAACT TTGCAGACTT GCGAATATCA GTTACCAACA CCTCTAGAAA TACGAGATTA TGAGGCACGT TTGGTAGTGA GTGGGACGGA TGAAGTCTTA GCTATTGTTC GAGATATCAC AGAACGGAAA CAAACAGAAG CCAAGTTACT GCTGACATAT CAAGAACTCG CAGACCTCAA CACCAATTTA GAACATCAGG TAGAAGAACG CACCGCCGAA TTACAACAGA AAATGCGGGA ACTAGAAGAA ATTCAACGCA TCAAAAATGT TGTATTGCAT ACCGTAGCCC ATGATTTACG TACTTCGGTG ATTGGTAATT TGATGGTGTT AGAGAATTTG GGAATGGGGA GTGGCGAGTG GAACGTAGGA AGTAGGGAAA ATAGGGGAAA CAGCGAACAT GAACTAGAAG AAAGTACAAT TCCCAATCCC CAATCCCCAG TCCCCAATCC CCAATCCCCA GTCCCCAGTA CCCAATCCCC AATCCCCAAT CCCCAACCCC TCATTTCCGT GCCACGTTCT ACTATCGATC GCATGATTCA AGGTAATAAT CGGCAATTGG GAATGCTAGA CTCGTTGCTA GAAATCCACT CCTGTGAGGA AAAAGAACTA ACCCTGCATC GGGAACTTGT TCCATTTGGC GGACTACTGG AAAAAATCAT TACAGACTTA CAACCACTGT TAAGAGAAAA TCAGGCAACT TGCAAGAACT TACTTCCTAA GGACTTACCT TTGGTGATGG TTGATCAAGT CCGGTTTGAG AAAGTTGTGA TGAGTTTGTT TAGTTATAGT TTGCAACACA ATCCCCCAGG GCTGGAATTT ACGGTCAAAA CCACAGTAGA AGATGGCATG ATTCGGACTC TGATTCAAGA TAACGGTATC ACAATGAGTA AGTCAGAGTG CGATCGCCTT TTCGATCTAC AAATCCGTGA TCCCCAAGCC CCCTGTTCCA CAGCAATTTG CTTAAAAATG TACCTGTGTC AGCAATTTAT TCAAGCACAT GGCGGAAACA TTGGTGCCAT GAGTAATCCT CGGCAAGGGC TAACCTTCTG GTTTACACTG CCTTCAAGTG GTTAA
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Protein sequence | MIIVNCNSFA GTSKAQRVDE TVKARHQQDQ QQLINRLQAT EAQYQAILNA IPDFIFRLSR DGNFLSLNGE VANLPCPGEE FTGKNIQNVL PTDIATMIQG IITKTLDTGT LQTCEYQLPT PLEIRDYEAR LVVSGTDEVL AIVRDITERK QTEAKLLLTY QELADLNTNL EHQVEERTAE LQQKMRELEE IQRIKNVVLH TVAHDLRTSV IGNLMVLENL GMGSGEWNVG SRENRGNSEH ELEESTIPNP QSPVPNPQSP VPSTQSPIPN PQPLISVPRS TIDRMIQGNN RQLGMLDSLL EIHSCEEKEL TLHRELVPFG GLLEKIITDL QPLLRENQAT CKNLLPKDLP LVMVDQVRFE KVVMSLFSYS LQHNPPGLEF TVKTTVEDGM IRTLIQDNGI TMSKSECDRL FDLQIRDPQA PCSTAICLKM YLCQQFIQAH GGNIGAMSNP RQGLTFWFTL PSSG
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