| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3541 |
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| Symbol | |
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| ID | 3679565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4408495 |
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| End bp | 4410462 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637718893 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_324043 |
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| Protein GI | 75909747 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCT TTTTGATCAA ATTGCAGAGA TTGTGGAGAA AGACTCTGTC TGCACTCACG
TTAGATGAAA TCACCACTGT TTACCAAAAT CGCTCTCAAC AACAGGAATG GCTGGTAAAT
AGGCAACGTT TTCTATGGCA GAGGCTACAT CTGTGGTTAT GGCTAGTACT AGGTTGTCTA
TTGACATTTA CCCTCAGGAA TGTATACGAC CTATTTTTTC CCCTCCGGGA GTTGAAGGCA
CTACCCCAGG TTTTGAGAAC TCAAGGGCTA ATGATCAATG CAGCTATGTT GTTGAGCCTG
CTAATTTGTT TTACTCTGCA TAAAACCCGG TTCGGTCATC GCCATCCAGG TGTCTTATTT
TTAGGCTCAT CTTGGTCGCT GAGTTTAGCA TCACAGTTAT TTGCCACCCT CAAAGGTTTT
GCCTTACCCG ATACCCTTGG CTGGTCGTTG CTATTTTTAA GTCAAGCTAC ACTCATGCCT
GTGCGCTGGA CTCTGCATTT AGTTTGTCAG GTAGGGATTT TAGTTTACTA TTTTGGTGTG
AACACAGCTT TGAGGCTCAG TACTCCTGCA CCGTACCATC CAGAAATATA TAATGTTACG
TTTATTCTCT ATATCTTTTG GTTTTGTATT ATATGTGATT TGGGGGTTTA CTTATACGAT
CGCCTGCAAC GCTCAGAATT TTACGCCCGC AAAGAACTAG AGTCAGCCAA CAATAAATTA
CGGCTAGCAG AAGCTAAATA TCGCAGCATC TTTGAAAATG CCATTGAAGG TATTTTTCAA
AGTAGCCCTG ATGGACGTTA CATTACGGCA AACCCCGCGT TAGCACGTAT TTATGGTTAC
ACTTCTCCCG AAGAAGTAAC AGAAAATTTT ACAGATATTG AGCATCAATT ATACGTTGAC
CCTAAACGCC GAGCCGAATT TGTCCGATTG ATGGAAGAGT CTGGATTAGC TCCGGAATTT
GAGTCACAGA TTTATCGTCA AGATGGCAGC GTTGTCTGGA TTTCCGAAAA AGCCTACGCC
GTTCGTGACG AGCAAGGAAA TCTCCTTTAC TACGAAGGGT TAGTTGAAGA TATTACCCAA
CGCAAACAAG CCCAAGAATC ACTGAGAGTC TTTTTCCATG CTGTGTCCCA TGACTTACGT
AACCCAGTTT TAGGGACTTT GATGGTGTTG AGGAATTTAC TTAATGATGA GGCAGGGGAG
CAGGGGGCAG GGAGCAGGGG GCAGGGGGCA GGGGAAGCAG GGGAGGCAGG GGGAGAACTG
ACTGCAAGAT TTTCGCCCAG TCCCCAGTCC CCAGTCCCCA ATCCCCAATC CCCAATACCC
AGTCCCCAGT CCCCAGTCCC CAGTCCCCAG TTCCCAGTCC CCAATACCCA ATCCCCAATC
CCCTTACCTC GCTCAATTTT AGAACGGATG GTGCAAAGTA GCGATCGCCA ACTCAATCTG
ATTAACTCTT TATTAGAAGC CCATATTGGT GAGGTGCAGG GTTTGAGCTT GCAATGTCAG
CCTGTACAAT TACAGATGGT GGTAGAAGCA GCGATCGCAG ATTTAGAACC CATGTTGGTA
GATAATCAAG CCACTTTGAT AAATTTAGTC ACCGCAGATT TACCATTAGT AAATGCCGAT
CCTACGCAAG TATGGCGAGT GTTTTCCAAC TTAATCGTCA ATGCCATCAA GCATAATCCC
CCTGGATTAC ACGTAACAAT CAATGCTATT CCCCAAGATG ACGAGATTTA CTGCACTGTC
AATGATAACG GTGTAGGGAT TAGTCAACAA CAGAGCGATC GGTTATTTGA CCTTTATTTT
CGGGGTGGTA GTATTCGCAA TTCCTTGGGT TTAGGCTTGG GTTTATACCT ATGTAAGCAA
ATCATTAATG CTCACGGCGG TGAAATTGGG GTAAAAAGTG GTTTAGAGAA AGGGGCTACA
TTCTGGTTTA CGTTGCCCAT GACATCAAAT CAGGTTAACC AATTATAG
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| Protein sequence | MTTFLIKLQR LWRKTLSALT LDEITTVYQN RSQQQEWLVN RQRFLWQRLH LWLWLVLGCL
LTFTLRNVYD LFFPLRELKA LPQVLRTQGL MINAAMLLSL LICFTLHKTR FGHRHPGVLF
LGSSWSLSLA SQLFATLKGF ALPDTLGWSL LFLSQATLMP VRWTLHLVCQ VGILVYYFGV
NTALRLSTPA PYHPEIYNVT FILYIFWFCI ICDLGVYLYD RLQRSEFYAR KELESANNKL
RLAEAKYRSI FENAIEGIFQ SSPDGRYITA NPALARIYGY TSPEEVTENF TDIEHQLYVD
PKRRAEFVRL MEESGLAPEF ESQIYRQDGS VVWISEKAYA VRDEQGNLLY YEGLVEDITQ
RKQAQESLRV FFHAVSHDLR NPVLGTLMVL RNLLNDEAGE QGAGSRGQGA GEAGEAGGEL
TARFSPSPQS PVPNPQSPIP SPQSPVPSPQ FPVPNTQSPI PLPRSILERM VQSSDRQLNL
INSLLEAHIG EVQGLSLQCQ PVQLQMVVEA AIADLEPMLV DNQATLINLV TADLPLVNAD
PTQVWRVFSN LIVNAIKHNP PGLHVTINAI PQDDEIYCTV NDNGVGISQQ QSDRLFDLYF
RGGSIRNSLG LGLGLYLCKQ IINAHGGEIG VKSGLEKGAT FWFTLPMTSN QVNQL
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