Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3519 |
Symbol | |
ID | 3679621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4370687 |
End bp | 4371514 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718871 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_324021 |
Protein GI | 75909725 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.728069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.293659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTG AAACAATATC CAGGGTTCCT GTTGCATTAA CCATTGCCGG TTCCGATAGT GGCGGCGGTG CAGGAATTCA AGCTGATTTA CGCACCTTTG CCTTTCATTG TGTCCACGGT ACTAGCGCTA TAACCTGCGT CACGGCACAA AATACCTTGG GAGTAGCCAG AGTTGACGCT ATGTCGCCGG AGGCAGTTGC AGCCCAAATA CAAGCCGTTG TGGAGGATAT TGGTGTACAG GCAGCGAAAA CTGGTATGTT GCTCAATCAA GGAATTATCG CTACTGTTGC CCAGCAAGTG GAAACTTTAG GAATAAATAA CTTAGTAGTT GACCCGGTAA TGGTTTCACG GACTGGGGCG CAATTAATTG ATGATAATGC TATCAAGACT CTGCGCCAGC AACTAATCCC TCTGGCGGCG ATAATTACAC CCAACAGGTA CGAAGCCCAA ATTTTAAGCG GTTTACCGAT AAATACCCTA GATGATATGA GGGCAGCAGC TCAAGTAATT CACCGCAATT TAAAAGCAAA GGCTGTGTTA GTCAAGGGTG GAGGGATGCA GGGAAATGCC CGTGGTGTGG ATATTTGGTT TGATGGACAA CATCTAGAAA CCCTGACAAC AAAGCAGGTA GATACCAAAA ATACTCACGG TACTGGTTGT ACTTTATCAG CTGCGATCGC CTCCAATCTA GCAAAGGGTC AAAATTTGCA CCAAGCTGTA ACTCAAGCAA AGGAATATGT CACTACTGCA CTCACTTACT CCCTCAATAT TGGGCAAGGA CAAGGGCCAG TAGGGCATTT CTTTCAGTTG TTACAAAATG ATGGGTAA
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Protein sequence | MNAETISRVP VALTIAGSDS GGGAGIQADL RTFAFHCVHG TSAITCVTAQ NTLGVARVDA MSPEAVAAQI QAVVEDIGVQ AAKTGMLLNQ GIIATVAQQV ETLGINNLVV DPVMVSRTGA QLIDDNAIKT LRQQLIPLAA IITPNRYEAQ ILSGLPINTL DDMRAAAQVI HRNLKAKAVL VKGGGMQGNA RGVDIWFDGQ HLETLTTKQV DTKNTHGTGC TLSAAIASNL AKGQNLHQAV TQAKEYVTTA LTYSLNIGQG QGPVGHFFQL LQNDG
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