Gene Ava_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3478 
Symbol 
ID3679790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4312212 
End bp4313018 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content47% 
IMG OID637718830 
Productseptum site-determining protein MinD 
Protein accessionYP_323980 
Protein GI75909684 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.144531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.63228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGCA TTATTGTAAT TACCTCCGGT AAAGGAGGGG TGGGTAAAAC TACAGTTTCG 
GCAAACTTGG GGATGGCCTT AGCCAAAATG GGTCGTCAAG TCGCCCTAGT AGATGCGGAT
TTTGGTCTAA GGAATTTGGA TTTGCTACTA GGGCTAGAAA ATCGCATTGT CTATACGGCA
GTGGAAGTTC TTTCTAGAGA ATGTCGCTTA GAACAAGCAT TAGTCAAAGA TAAGCGCCAG
CCTAACCTCG TCCTCTTACC AGCAGCCCAA AACCGGACAA AAGATGCAGT AACGCCCGAA
CAGATGAAGT TATTGGTGAA CGCCCTGGCG CAAAAGTACC AGTATGTGAT CATCGATAGC
CCAGCTGGTA TTGAAAACGG CTTTAAAAAT GCGATCGCCC CAGCAAAAGA AGCTCTCATT
GTCACCACCC CAGAAATTTC CGCCGTGCGT GATGCTGATA GGGTCGTTGG CTTACTCGAA
GCCCAAGGCG TTAAGCGCGT TCACTTGATT ATTAACCGGA TCAGACCAGC AATGGTTCGG
GCAAATGATA TGATGTCTGT TCAAGATGTT CAGGAACTTC TGGCAATACC CTTGATTGGG
GTACTTCCTG ATGATGAGCG TGTTATTGTC TCCACCAATC GCGGCGAACC TCTGGTATTA
GGAGATACTC CTTCCCTAGC CGCCGTAGCC GTTGAAAATA TTGCTCGCAG ATTGGAAGGA
GATACAGTTG AATTTCTCGA CCTTGACGCA CCCCACGATA GCATCTTCGC TCGTTTGCGG
AGGTTGTTAT GGACTAAGAT TGTGTAA
 
Protein sequence
MTRIIVITSG KGGVGKTTVS ANLGMALAKM GRQVALVDAD FGLRNLDLLL GLENRIVYTA 
VEVLSRECRL EQALVKDKRQ PNLVLLPAAQ NRTKDAVTPE QMKLLVNALA QKYQYVIIDS
PAGIENGFKN AIAPAKEALI VTTPEISAVR DADRVVGLLE AQGVKRVHLI INRIRPAMVR
ANDMMSVQDV QELLAIPLIG VLPDDERVIV STNRGEPLVL GDTPSLAAVA VENIARRLEG
DTVEFLDLDA PHDSIFARLR RLLWTKIV