Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3452 |
Symbol | |
ID | 3679842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4282325 |
End bp | 4283797 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637718804 |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_323954 |
Protein GI | 75909658 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC CTTCCTTTCG GCTGCGAATT GCTCTGTTAT CTGCCGCTTT GGCTGGCACT ACACTAGTAG GATTTAGTGC AGTCTCTTGG TTGCAAATTT ACGATGCTAA ACTCAGTCGC CTGGATGCAG AACTGTTAAA TCAACTGATG CGGGCAGCAC CAAACTTACT TCCACCCAGA GAACCCCCTA CATTTTTCAC TAGGGAAAAT TTTCGTCCAC CTATGCCAGA GCCTTGGCAG CGTTACGAAG AATTATTATC TTCCGCCTTT GGTGGAAATG CAAAAACACC TATTGTACTG TTGGTACTGG ATGCAGAAGG CAACCAACTT TATGAATCCC CACAAACTTC TCCTGACTCT GACTTACGTC GCCTGTTGCT TCAGAATCTC CAGTTAGCGC CTCAACCACA ACCCCCCCGG CCTTTACCCA ATCTTCCCTT GCGCCCCCCA CGTCCACCGC AATTTGTCAC CCAAAAGACA ACAAGCGGCA GTTGGCGAAT TGGTGCAACT AAATTTCCCC GTTCTCAGGT TGCGATCGCT GTCAGTCTGC AAACCGTCAA TCAAGAGATG GCAGCCATTC GCAATATATA TCTTGTTTCC ATTCCCATCG CCTTGCTACT AGTTACCTCT GGAGCTTGGT TAGTTTCTGG TAGTGCATTG CGTCCGATTC GGCAATTAAC GGCTGTAATT CAACAGGTGA GCGCCAAAGG TTTAGATCAG CGCATTCCCA TCGGTACGAC GGATGTTGAA TTTGTAGAAC TAATTCAGGT GTTTAATCAA ATGTTGGAAC GCCTGGAAAG CAGTTTTACC CAAGCCTCTC GCTTCAGTGC AGATGCAGCC CACGAACTGA AAACCCCCCT AACAATTCTC CAAGGTGAAC TGGAACGCAC CCTGCAACAG GTGGAACCAG GCTCGGAAGT ACAACAGCGT TTAAGCAATT TATTAGATGA AGTGCGCCGC TTGAGTGGAA TTATGCGTAA ACTCTTGCTG TTGTCCTTAG CCGATGCAGG ACAAATGAGT TTGTATCTAG TGGAAGTAGA TATGTCTGAG TTATTAATGG AGATGGTTGA GGATGTGGAA TTACTCGCGC CCCATTTGAG TGTACACATC GAAATTCCTG AGAAATTGCG GGTTAAAGGC GATCGCGATC TCCTCATCCA AGTGTTGCAA AACCTGTTGA GTAATGCCAT CAAATACAAT CTCCCCCAAG GTTGGATCAA AATTCACGCT CATCAAACCC CAACCACTAT CCACATCACT ATTAGCAACT CATCCCCAGA CATTCCCCCA AGCGATCGCG ATCGCTTATT TGAGCGTTTC TATCGTGGTG ATCCCGCCCG CACACGCAAA GTAGAAGGCA TCGGGCTAGG ACTCAGCCTG TCCCGTGAAA TTGCCCGCGC CCATCGTGGT AACTTAACCT TAGATGCGGA AAATTCTGGT CAAACAAGGT TGACTCTGAC TTTACTCCGG TGA
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Protein sequence | MKLPSFRLRI ALLSAALAGT TLVGFSAVSW LQIYDAKLSR LDAELLNQLM RAAPNLLPPR EPPTFFTREN FRPPMPEPWQ RYEELLSSAF GGNAKTPIVL LVLDAEGNQL YESPQTSPDS DLRRLLLQNL QLAPQPQPPR PLPNLPLRPP RPPQFVTQKT TSGSWRIGAT KFPRSQVAIA VSLQTVNQEM AAIRNIYLVS IPIALLLVTS GAWLVSGSAL RPIRQLTAVI QQVSAKGLDQ RIPIGTTDVE FVELIQVFNQ MLERLESSFT QASRFSADAA HELKTPLTIL QGELERTLQQ VEPGSEVQQR LSNLLDEVRR LSGIMRKLLL LSLADAGQMS LYLVEVDMSE LLMEMVEDVE LLAPHLSVHI EIPEKLRVKG DRDLLIQVLQ NLLSNAIKYN LPQGWIKIHA HQTPTTIHIT ISNSSPDIPP SDRDRLFERF YRGDPARTRK VEGIGLGLSL SREIARAHRG NLTLDAENSG QTRLTLTLLR
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