Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3438 |
Symbol | |
ID | 3679906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4268575 |
End bp | 4270050 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718790 |
Product | peptidase M50 |
Protein accession | YP_323940 |
Protein GI | 75909644 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.526789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCT GGTTTCTCCT CCTATTGGGA ATAGCTACTT ATCTGATGGT GCAGCGCAGT GTTGCTAACA TCACCAAAAC ACCCATCTGG CTGTTATGGC TGGTGTTGAT GACACCTGCG TTGGTTTTAA CTGGATGGAC ACTAGTTTAT GGGGTAAAAC AACCGCCACC GCCAGCACTG ATATTTTGGC CGTCAATTAT CTGCCTTTTG TTATACTGGC TTTTGTTTCA GTGGGGACGG CAATTGCCGA GGGATACACA AACTGCACCC CAAACCACAG AATCACAATC GGCTAATCAT CCTACCGCAG AACCAGTGCC TGTACGTCCC ATTGAACCCA CGGAAGAAAC CCAGCTGCGA AACTGTTTTC CCTGGTCTAT TTACTACGTC CAAAACATTG AGTATAGACC CCAGGCGGTG ATTTGCCGAG GGCAGTTGCG AACTACACCA ACTCAAGCTT ACCAGCAGAT TAGAGCTAAC ATTGAAGCTC AATTTGGCGA TCGCTTCTTG CTCATCTTTC AAGAAGGATT TAATGGTAAG CCGTTCTTTG TATTGGTTCC CAACAGCCAA GCTGCTAAAG CTAATGCTAG ACAATCCGAG CCATTAACAC GCCCAGGATT GGCTTTATTA CTGTTAGTGG CTACTTTGGT AACTACCACT CTGGTAGGTG TAAAAATCGC CGGGATTGAC CCTACAAGGC TGCAATCTGA CCCGAAATTA CTTTTACAGG GATTACCCTA TGCTTTAGCT TTAATGACTA TCTTGGGTAT CCATGAGATG GGTCATTACT TCACCGCTAG ATTCTATAAA ATTCGCTCGA CCCTGCCCTA CTTTATCCCC ATACCTTTTT TCTTGGGAAC TTTTGGTGCA TTTATTCAAA TGCGGAGTCC AATTCCCAAC CGTAAGGCTT TATTTGATGT TGGTATTGCT GGACCTCTAG CTGGGTTTAT CGCTACATTA CCGCTAGTTA TTTGGGGTTT GGCTCATTCA GATTTGGTTC CCCTGACTGA AAATACTAGT TTGTTAAACC CTGATGCACT GAATCCTAAA TATTCAATCC TTGTGGCGTT ACTGGCTAAA TTAGCTTTAG GAAGCGCCTT AACAGCAAAA TTAGCGATTG ATTTACATCC AGTCGCAGTA GCTGGTTTTT TGGGATTAAT TGTCACAGCA TTAAATCTTA TGCCCGTGGG GCAATTAGAT GGTGGTCATA TTGTCCATGC GATGTTTGGG CAAAGAACTG CTATGTTTAT TGGTCAAATT GCCCGTCTGT TGCTGTTGTT ACTGTCTTTA GTTCAATCTG AATTTTTCGT ATGGGCAATT ATCTTATTGT TTATTCCCTT AGTCGATGAA CCAGCTTTAA ATGATGTGAC TGAATTGGAC ACCAAACGCG ATATTTTAGG TTTGTTGGCA ATGGCTTTAC TGGTGATCAT TGTGCTACCC ATGCCAGAGG CGATCGCTAA TTTATTGCAA ATCTAA
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Protein sequence | MTFWFLLLLG IATYLMVQRS VANITKTPIW LLWLVLMTPA LVLTGWTLVY GVKQPPPPAL IFWPSIICLL LYWLLFQWGR QLPRDTQTAP QTTESQSANH PTAEPVPVRP IEPTEETQLR NCFPWSIYYV QNIEYRPQAV ICRGQLRTTP TQAYQQIRAN IEAQFGDRFL LIFQEGFNGK PFFVLVPNSQ AAKANARQSE PLTRPGLALL LLVATLVTTT LVGVKIAGID PTRLQSDPKL LLQGLPYALA LMTILGIHEM GHYFTARFYK IRSTLPYFIP IPFFLGTFGA FIQMRSPIPN RKALFDVGIA GPLAGFIATL PLVIWGLAHS DLVPLTENTS LLNPDALNPK YSILVALLAK LALGSALTAK LAIDLHPVAV AGFLGLIVTA LNLMPVGQLD GGHIVHAMFG QRTAMFIGQI ARLLLLLLSL VQSEFFVWAI ILLFIPLVDE PALNDVTELD TKRDILGLLA MALLVIIVLP MPEAIANLLQ I
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