Gene Ava_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3436 
Symbol 
ID3679904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4267137 
End bp4267655 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content43% 
IMG OID637718788 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_323938 
Protein GI75909642 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.948482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA ATCCCATGCA GAGAGGTCAG CAGTGGTTAC AATCACTGCT GGAACTCACT 
GGGGTATCAG CTGAGATTCA CGGTAGTGTA GAAACTGCTC AATCTCACAA TGAAGATTCC
CAAGAAACAG ATGGTTACTG GTTGACAATT GACGCAACTA ATTTAAACCC ACAGCAAATT
CAAACTTTAA TTGGTGCTGA TGGCTCTGTA TTAGATGCAA TTCAGTATTT AGTTAATTCC
ACTCTCAATA TCAATCAACC CCAGGAAGGA CAAGCTTCCT ACACCGTGGA ATTGAACGGT
TATAGGGTTA AACGACAAGC CGAAATTCAA CAAATCGCAG AAACAGCCGC CGAGCAGGTA
CGTTCTACAG GTCAAGAAGT AGAGATTAAA TCCCTCAGTT CTGCGGAACG GCGTTTAGTA
CACACTTTCC TAAAAGACTT TGGCGATTTA GAAACCTTTA GCCGTGGTAA AGAACCCCAT
CGTCATTTAG TTGTGCGTCC GGCTGTGAAT GAATTATGA
 
Protein sequence
MSNNPMQRGQ QWLQSLLELT GVSAEIHGSV ETAQSHNEDS QETDGYWLTI DATNLNPQQI 
QTLIGADGSV LDAIQYLVNS TLNINQPQEG QASYTVELNG YRVKRQAEIQ QIAETAAEQV
RSTGQEVEIK SLSSAERRLV HTFLKDFGDL ETFSRGKEPH RHLVVRPAVN EL