Gene Ava_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3430 
Symbol 
ID3679898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4262285 
End bp4263442 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content46% 
IMG OID637718782 
Productalanine dehydrogenase/PNT-like protein 
Protein accessionYP_323932 
Protein GI75909636 
COG category[C] Energy production and conversion 
COG ID[COG3288] NAD/NADP transhydrogenase alpha subunit 
TIGRFAM ID[TIGR00561] NAD(P) transhydrogenase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAG CCGTTGCTAA AGAAATTGAA GTTTGTGAAC GACGTGTAGC CTTAAATCCT 
GACACGGTTG CCCGATTGGT AAAACAAGGT TTAGAGGTTT GGGTAGAAGC AGGCGCAGGA
GAGCGATCAT TTTTTGATGA TGCTGCCTAT GTAGCAGCAG GAGCAACAAT TGTTGGTGAT
GCTGGTAAAT TATGGGGCGA AACAGATGTT TTGTTGAAAG TTAGCCCACC ACAAGAACGG
GAAGATGGGC GCTTAGAGAT TGATTTATTA CGGGAAGGTG CTGTTTTAAT TAGTTTTCTG
AATCCCTTGG GTAATCCGGT AGTGGCGCAG CAACTAGTGA ATCGTAAAGT CACAGCCTTG
AGTATGGAAC TGATCCCCAG AACTACCAGG GCGCAATCGA TGGATGCTTT ATCTTCACAA
GCGTCACTGG CGGGTTATAA AGCGGTATTA ATTGCGGCGG CGGCGTTACC AAAATATTTC
CCGATGTTGA CAACTGCCGC AGGGACAATT GCCCCAGCTA AAGTATTTAT TATGGGTGCT
GGTGTTGCAG GATTGCAAGC GATCGCCACA GCTAGACGTT TGGGCGCAGT GGTAGAAGCC
TTTGATATTC GTCCGGCGGT GAAAGAAGAA GTGCAAAGCT TAGGGGCAAA GTTCGTCGAA
GTCAAACTCG AAGAAGAAAC CACAGCCCAA GGTGGCTATG CTAAAGAAAT TTCTGAAGCC
AGCAAACAGC GCACCCAAGA AGTCGTCGCC GAACACGTTA AAAATTCTGA TGTAGTCATT
ACAACTGCTC AAGTACCAGG TAGAAAAGCA CCAGTGCTAG TTACAGCCGA AATGGTTGCA
CAAATGAAAC CTGGTTCAGT GATTGTAGAT TTAGCGGCTG AACAAGGTGG TAACTGTGCT
TGTACCGAAC CCGGTAAAGA TATTGTCTGG AATGGGGTGA CAATCATCGG CCCGATTAAT
CTCCCTTCAT CAATGCCAGT CCACGCCAGC CAATTGTATT CCAAGAACCT CACATCTTTG
CTGCAATTGC TCATTAAAGA TAAAGCATTA CAAGTAGATT TTACCGACGA CATCATTGAT
GCTGCTTGCA TTACTCACGC TGGGGAAATT CGCAATCAAC GTGTCAAAGA TGCGTTGCAA
GCTGTGGTAG TTCGCTAA
 
Protein sequence
MRIAVAKEIE VCERRVALNP DTVARLVKQG LEVWVEAGAG ERSFFDDAAY VAAGATIVGD 
AGKLWGETDV LLKVSPPQER EDGRLEIDLL REGAVLISFL NPLGNPVVAQ QLVNRKVTAL
SMELIPRTTR AQSMDALSSQ ASLAGYKAVL IAAAALPKYF PMLTTAAGTI APAKVFIMGA
GVAGLQAIAT ARRLGAVVEA FDIRPAVKEE VQSLGAKFVE VKLEEETTAQ GGYAKEISEA
SKQRTQEVVA EHVKNSDVVI TTAQVPGRKA PVLVTAEMVA QMKPGSVIVD LAAEQGGNCA
CTEPGKDIVW NGVTIIGPIN LPSSMPVHAS QLYSKNLTSL LQLLIKDKAL QVDFTDDIID
AACITHAGEI RNQRVKDALQ AVVVR