Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3423 |
Symbol | |
ID | 3679949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4254242 |
End bp | 4256257 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637718775 |
Product | arginine decarboxylase |
Protein accession | YP_323925 |
Protein GI | 75909629 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTTG AGTCAACTGC TACATCTGAC GAGGTGGTAA AAGTACCAGC CAACGGGAAC AAGTTGGAGG GGAAAAATCA CAAGCAGAAA AAGCTGCTAC CAACGAATGC GCCAGGAGAT GTATCTCGCG CTTGGAAGAT TGAGGACAGC GAAGCTTTAT ACCGGATTGA AGGTTGGGGA CAGCCTTATT TCTCGATTAA TGCGGCTGGT CACGTTACTG TTTCTCCCAA AGGCGATCGC GGCGGTTCTT TGGACTTGTT TGAATTGGTC AATGCTTTGA AACAACGCAG TTTGGGTTTA CCCTTACTGA TTCGCTTTTC GGATATTTTA GAAGACCGCA TTGAACGCTT AAACGCTTGT TTTGCCAAGG CGATCGCTCG CTACAATTAC CCTGGTGTAT ATCGTGGCGT GTTTCCTGTC AAGTGCAACC AGCAACGGCA TTTGATTGAA GATTTAGTGA GATTTGGCAA GCCACATCAG TTTGGTTTAG AAGCTGGTTC CAAGCCGGAG TTAATGATTG CTTTGGCGTT ATTGGATACC CCTGGATCTT TGCTAGTTTG CAACGGCTAC AAAGACCGGG AGTATGTGGA AACGGCCATG TTATCCCAAA GACTAGGCCA AACACCAATC ATCGTCCTAG AACAGGTGGA AGAGGTCGAT TTAGTGATTG CGGCTAGTCA CCAATTAGGC ATTAAGCCGA TTTTGGGGGT ACGGGCAAAA TTAAGCACCC AAGGGATGGG ACGCTGGGGT ACATCCACAG GCGATCGCGC TAAATTTGGC CTGACAATTC CCGAAATCAT CCAAGCAGTT GATAAGTTAC GTGATGCTGA CTTGCTGGAT TCTTTGCAAT TAATGCACTT CCATATTGGT TCGCAAATCT CCGCCATCAA TGTCATTAAA GATGCCATCC AAGAAGCTAG CCGGATTTAC GTGGAGTTAG CATCCTTGGG GGCTAATATG AAATATCTGG ATGTTGGCGG CGGCTTGGGT GTGGATTATG ACGGTTCCCA GACGAACTTC TACGCCTCCA AGAACTACAA TATGCAGAAC TATGCCAACG ACATCGTGGC AGAGTTAAAA GATACCTGTG CAGAGAAACA AATTCCCGTA CCCACACTGA TTAGTGAAAG CGGTAGAGCG ATCGCCTCCC ATCAATCGGT ACTCATTTTC GATGTTCTCA GTACCAGTGA TGTCCCCCGC GATAACCCAG AACCACCAAA AGAAGGTGAA TCCCCAGTTA TTAATTACCT GTGGGAAACC TATCAATCCA TCAACAAAGA AAACTATCAA GAGTTCTACC ACGACGCTAC CCAATTCAAG GAAGAAGCCA TTAGCCGCTT CAACTTGGGC ATTTTACGCC TGCGTGAACG AGCCAAAGCT GAACGTCTTT ACTGGGCTTG TTGTCAGAAA ATTTTAGACA TTATTCGTCA GCACGATTAC GTACCTGATG AGTTGGAAGA CCTAGAAAAA ATCATGGCTT CTATCTACTA CATCAATCTT TCGGTGTTTC AATCAGCACC AGATTGCTGG GCGATCGATC AACTGTTCCC AATTATGCCC ATCCATCGCC TAGATGAAGA ACCAACGCAG CGAGGAATTT TAGCAGACCT CACCTGCGAT AGTGATGGCA AAATTGATCG CTTTATCGAC TTACGGGATG TCAAATCTGT GCTAGAACTG CACCCCTTCC AACCGGGAGA ACCCTATTAT ATGGGAATGT TCCTCAATGG TGCTTATCAG GAAATTATGG GGAACTTACA CAACTTATTC GGCGATACCA ACGCCGTTCA TATCCAATTA ACACCCAAAG GCTACCAAAT TGAACACGTA GTCAAAGGCG ATACCATGAG TGAAGTGGTG AGCTACGTCC AATATGACTC CGAGGACATG GTAGAAAACA TCCGCCAACG TTGCGAGCGG GCGTTAGAAG AAAAACGCAT TACCTTAGCC GAATCCCAAC GCTTACTCCA GACTTACGAA CAAAGTCTCA GAAGATACAC ATACTTAAAT AGTTAG
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Protein sequence | MGVESTATSD EVVKVPANGN KLEGKNHKQK KLLPTNAPGD VSRAWKIEDS EALYRIEGWG QPYFSINAAG HVTVSPKGDR GGSLDLFELV NALKQRSLGL PLLIRFSDIL EDRIERLNAC FAKAIARYNY PGVYRGVFPV KCNQQRHLIE DLVRFGKPHQ FGLEAGSKPE LMIALALLDT PGSLLVCNGY KDREYVETAM LSQRLGQTPI IVLEQVEEVD LVIAASHQLG IKPILGVRAK LSTQGMGRWG TSTGDRAKFG LTIPEIIQAV DKLRDADLLD SLQLMHFHIG SQISAINVIK DAIQEASRIY VELASLGANM KYLDVGGGLG VDYDGSQTNF YASKNYNMQN YANDIVAELK DTCAEKQIPV PTLISESGRA IASHQSVLIF DVLSTSDVPR DNPEPPKEGE SPVINYLWET YQSINKENYQ EFYHDATQFK EEAISRFNLG ILRLRERAKA ERLYWACCQK ILDIIRQHDY VPDELEDLEK IMASIYYINL SVFQSAPDCW AIDQLFPIMP IHRLDEEPTQ RGILADLTCD SDGKIDRFID LRDVKSVLEL HPFQPGEPYY MGMFLNGAYQ EIMGNLHNLF GDTNAVHIQL TPKGYQIEHV VKGDTMSEVV SYVQYDSEDM VENIRQRCER ALEEKRITLA ESQRLLQTYE QSLRRYTYLN S
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