| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3277 |
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| Symbol | |
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| ID | 3680308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4086796 |
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| End bp | 4090032 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637718628 |
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| Product | SNF2-related helicase |
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| Protein accession | YP_323780 |
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| Protein GI | 75909484 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.65326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATTT TACACGGTAG TTGGATATTA AGTGAGCAGG ATAGTTATTT ATTTATTTGG
GGGGAAACTT GGCGATCGCC ACAAGTAAAT TTTAGTTTTG AGGAAATAGC CCTCAATCCC
TTGGCTCTGT CTGCATCTGA ATTAAGCGAG TGGTTGCAGT CTCAACATCA GGCGATCGCT
CAGATTTTAC CACAACAGTT GGCAAAAAAA ACCTCCAAAG CAGCAAGTTC CCCAACAACA
AATTTACCAA TTCACTCGCA AATAATTGTT CTGCCAACGG AAATTTCTCA ACCTCGTAAG
AAAGAAACAA TTTTCATTTC TCCTGTGCAT TCTGCCGCTT TAGAATCTGA TGCAGACTCT
GAAGTTTATT TACAACCTTG GCGTGTAGAA GGTTTTTGTC TTCCTCCTAG TGCAGCAGTT
AAATTTCTAA CTTCTTTACC TTTAAATATC ACTAGCACAG AGAATGCTTT TTTAGGTGGA
GATTTACGTT TTTGGTCACA AATTGCCCGT TGGAGTTTAG ATTTAATTTC TAGGTCTAAG
TTTCTCCCAA TTATCCAACG ACAACCTAAT AATTCTGTAA GTGCCAAATG GCAAGTACTG
TTAGATAGTG CTGTAGATGG AACTCGTTTA GAAAAGTTCG CCGCGAAGAT GCCTTTGGTT
TGTCGGACTT ATCAGAGATT AGGGAACGAG GAATTATCTC CATCTCCTAT ATATATAGAT
TTTCCTAGTC AGCCGCAGGA ATTAATATTG GGTTTTCTCA ATAGTGCAAT AGATACGCAA
TTACGGGAAA TGGTGGGGAA TCAGCCTGTG GTGGAAACTC GCTTGATGGC ATCTTTACCG
TCGGCGGTAC GACAGTGGCT GCAAGGGTTA AGTGGTGCAT CTAATTCAGT TGATGCAGAT
GCAGTTGGTT TGGAAAGGCT GGAAGCAGCG CTCAAGGCTT GGACGATGCC GCTACAATAT
CAACTAGCAA GTAAAAATCA ATTTCGCACC TGTTTTGAAT TACGTTCTCC AGAACCAGGA
GAAACTGAAT GGACACTAGC CTATTTCCTG CAAGCAGCCG ATAATCCAGA ATTTCTAGTA
GATGCGGGCA CTATTTGGCA ACATCCTGTT GAACAGCTAA TTTATCAACA GCGATCGATT
CAAGAACCCC AGGAAACATT TTTACGAGGT TTGGGGTTAG CTTCTCGATT GTATCCGGTC
ATTGCCCCCA CTTTAGATAC AGAATCACCG CAATTTTGTC ATCTCAACCC CATGCAGGCT
TATGAATTTA TCAAGGCTGT GGCTTGGCGA TTTGAAGATA GCGGTTTAGG GGTGATTTTA
CCTCCTAGTT TGGCGAACCG GGAAGGCTGG GCAAACCGCT TGGGATTGAA AATCTCCGCC
GAAACCCCAA AGAAAAAGCC AGGACGCTTG GGATTGCAGA GTTTGCTTAA TTTTCAATGG
CACTTAGCAA TTGGTGGGCA AACTATTTCT AAAGGGGAAT TTGACAGACT AGTAGCTTTA
AAAAGCCCAT TGGTAGAAAT AAATGGCGAA TGGGTGGAGT TGCGTCCCCA AGATATCAAG
ACAGCCGAAG CCTTTTTTGC TGCACGTAAA GACCAAATGG CCTTATCTTT AGAAGATGCT
TTACGTCTGA GTAGTGGGGA TACTCAAGTA ATTGAGAAAT TACCAGTAGT CAGCTTTGAA
GCCTCTGGCG CATTACAAGA ATTAATTGGG GCGCTGACAA ATAATCAAGC AGTTGCACCA
TTACCTACGC CAAAGAACTT CCAAGGAAAG TTGCGTCCTT ATCAAGAAAG GGGTGCGGCT
TGGTTGGCAT TCCTCGAACG CTGGGGTTTA GGTGCTTGTC TCGCCGACGA CATGGGACTG
GGAAAAACGA TACAGTTCAT TGCTTTCCTT CTCCATCTTA AAGAACAGGA TGTATTAGAA
AAACCAACTT TACTAGTGTG TCCTACTTCT GTTTTAGGTA ACTGGGAACG AGAAGTGAAA
AAATTTGCAC CTACACTTAA AGTTCTCCAA TATCATGGTG ATAAACGTCC TAAAGGTAAA
GCTTTTCCAG AAGCAGTAAA AAATCATGAT TTAGTTATCA CCAGTTACTC ACTAATTCAT
AGAGACATCA AATCATTGCA GGGTCTTTCT TGGCAGATAA TTGTTTTAGA TGAAGCCCAG
AATGTGAAGA ATGCGGAAGC CAAACAATCA CAAGCAGTCC GACAATTAGA CACAACCTTT
CGCATTGCTT TAACGGGGAC ACCAGTCGAA AATAGACTAC AGGAACTTTG GTCAATTTTA
GATTTCCTCA ACCCTGGTTA TTTAGGTAAT AAGCAATTCT TCCAAAGACG CTTTGCCATG
CCAATTGAAA AGTATGGTGA TGCAGCATCT TTAAATCAAT TGCGTGCCTT AGTACAACCA
TTTATTCTGC GTCGCCTGAA AACAGACCGT GATATTATTC AAGACTTGCC AGATAAGCAA
GAAATGACAG TATTTTGCGG TTTGACTGGA GAACAAGCTG CACTTTATCA AAAAGTGGTA
GAAACATCTT TAGCAGAAAT TGAATCGGCC GAAGGATTGC AACGCCGAGG GATGATTTTA
GCTTTATTAA TTAAACTCAA ACAAATCTGC AATCATCCAG CCCAATATCT GAAAACAAAT
ACCTTAGAAC AATACAGTTC AGGAAAACTG CAACGATTAG AAGAAATGTT AGAAGAGGTG
TTAGCGGAGA GTAATACTTA TGGTGTTGCT GGTGCGGGAC GTGCTTTAAT CTTCACCCAG
TTTGCAGAAT GGGGTAAGTT ACTCAAACCA CATTTAGAAA AACAACTAGG GCGGGAAGTA
TTTTTCTTAT ATGGTAGTAC CAGTAAAAAG CAACGTGAAG AAATGATTGA CCGTTTTCAA
CACGACCCTC AGGGGCCACC AATTATGATT CTCTCTCTCA AAGCAGGTGG TGTAGGGTTG
AACTTAACCA GAGCAAATCA TGTATTTCAC TTTGATAGAT GGTGGAATCC AGCCGTAGAG
AACCAAGCCA CAGACCGCGT ATTTCGTATT GGTCAAACCC GCAATGTACA GGTGCATAAA
TTTGTTTGCA ATGGTACCTT AGAAGAAAAA ATCCACGACA TGATTGAAAG TAAAAAACAA
CTAGCGGAAC AGGTTGTTGG TGCAGGCGAA GAGTGGTTAA CTGAATTAGA TACAGATCAA
CTCCGCAACT TACTGATACT TGATCGTAGT GCAGTAATTG ATGAAGAAGC AGAGTAA
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| Protein sequence | MAILHGSWIL SEQDSYLFIW GETWRSPQVN FSFEEIALNP LALSASELSE WLQSQHQAIA
QILPQQLAKK TSKAASSPTT NLPIHSQIIV LPTEISQPRK KETIFISPVH SAALESDADS
EVYLQPWRVE GFCLPPSAAV KFLTSLPLNI TSTENAFLGG DLRFWSQIAR WSLDLISRSK
FLPIIQRQPN NSVSAKWQVL LDSAVDGTRL EKFAAKMPLV CRTYQRLGNE ELSPSPIYID
FPSQPQELIL GFLNSAIDTQ LREMVGNQPV VETRLMASLP SAVRQWLQGL SGASNSVDAD
AVGLERLEAA LKAWTMPLQY QLASKNQFRT CFELRSPEPG ETEWTLAYFL QAADNPEFLV
DAGTIWQHPV EQLIYQQRSI QEPQETFLRG LGLASRLYPV IAPTLDTESP QFCHLNPMQA
YEFIKAVAWR FEDSGLGVIL PPSLANREGW ANRLGLKISA ETPKKKPGRL GLQSLLNFQW
HLAIGGQTIS KGEFDRLVAL KSPLVEINGE WVELRPQDIK TAEAFFAARK DQMALSLEDA
LRLSSGDTQV IEKLPVVSFE ASGALQELIG ALTNNQAVAP LPTPKNFQGK LRPYQERGAA
WLAFLERWGL GACLADDMGL GKTIQFIAFL LHLKEQDVLE KPTLLVCPTS VLGNWEREVK
KFAPTLKVLQ YHGDKRPKGK AFPEAVKNHD LVITSYSLIH RDIKSLQGLS WQIIVLDEAQ
NVKNAEAKQS QAVRQLDTTF RIALTGTPVE NRLQELWSIL DFLNPGYLGN KQFFQRRFAM
PIEKYGDAAS LNQLRALVQP FILRRLKTDR DIIQDLPDKQ EMTVFCGLTG EQAALYQKVV
ETSLAEIESA EGLQRRGMIL ALLIKLKQIC NHPAQYLKTN TLEQYSSGKL QRLEEMLEEV
LAESNTYGVA GAGRALIFTQ FAEWGKLLKP HLEKQLGREV FFLYGSTSKK QREEMIDRFQ
HDPQGPPIMI LSLKAGGVGL NLTRANHVFH FDRWWNPAVE NQATDRVFRI GQTRNVQVHK
FVCNGTLEEK IHDMIESKKQ LAEQVVGAGE EWLTELDTDQ LRNLLILDRS AVIDEEAE
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