Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3226 |
Symbol | |
ID | 3680646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4010379 |
End bp | 4012331 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637718576 |
Product | multi-sensor Signal transduction histidine kinase |
Protein accession | YP_323729 |
Protein GI | 75909433 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCGC TGTTAAAAAC AATTCGAGAA GCGATCGCCA ATTGGTGGTC AGAGTTCACA CTCCAGACTA AACTGTTAGC CGCAGCCACT TTGGTGGTTT CCCTGGTGAT GAGCGGTCTC ACCTTTTGGG CGGTAAACAC AATTCAGCAA GATGCCCAAG TGAATGACAC CCGTTTTGGG CGGGATTTGG GTCTACTTCT GGCTGCTAAT GTTGCACCCC TGGTTGCAGA CCATAATCTA ACTGAAGTTG CCCAATTTTC CCAACGCTTC TACAGCAGCA CTTCTAGTGT GCGTTATATG CTCTACGCTG ATGAAACGGG GAAAATCTTT TTTGGCATTC CCTTTTGGGA ACCAGAGGTA GAAAACTCCC TCTCAATTGA GCGCCGCATA CAATTACCAG AAGAGTACCC TGGTGAGGGC GAAAAGCCAA TGGTACGGCA ACACATGAGT CCAGATGGAA CTGTGACTGA TGTGTTCATT CCCCTAATTG CCGATAAAAA ATACTTGGGT GTGTTGGCTA TTGGCATCAA CCCCAACCAA ACAGCCGTTA TCTCCACCAA TTTTACCCGC GATGTCACCA TTGCGGTTTT TATTACGATT TGGGTCATGG TGATTTTGGC AGGGGTGGTT AATGCCTTGA CTATCACCAA GCCGATTAAA GAATTATTGG TAGGGGTAAA ACAAATCGCG GCTGGTAATT TTAAGCAGCG TATTGATTTG CCCTTGGGAG GCGAACTAGG AGAGTTAATT CTCAATTTTA ATGAAATGGC AGAGCGCCTA GAGCGCTATG AAGAGCAGAA TATTGAGGAA CTAACAGCCG AGAAAGCCAA GCTAGAAACC TTAGTTTCCA CAATTGCCGA CGGTGCTGTG TTGATTGACA ACAATATGCA GGTGATTTTA GTCAACCCCA CAGCCAGACA CATTTTCGGC TGGGAAGGCG CTGATGATGT GGTGGGTAGT AATGTATTGC ATCACTTACC CCCAACGGTA CAAATGGAAA TCACCAGACC ACTATACGAA ATGGCAGCCG GTGAATGTGA TAGTGCTGAA TTTCGCCTGA CTCTCAACCA ACCCAGTAAC CGCACAATTC GCATTCTTTT GACTACAGTC CTCAATCTGC AACGGGAAAG TATCAAAGGT ATTGCCATTA CGGTGCAGGA TATTACCCGT GAGGTGGAAC TAAACGAAGC CAAAAGCCAA TTTATCAGCA ACGTTTCCCA CGAACTGCGA ACGCCTTTAT TTAATATCAA ATCTTTTATT GAAACCCTCC ACGACTACGG CGAAGACTTG AGCATAGAAG AACGCCAGGA GTTTCTGCAA ACAGTTAATC ATGAAACTGA TCGCCTGACT CGTCTTGTTA ATGATGTTTT AGATTTATCT AAGTTGGAAT CTGGTCGTAG CTACAGTTTC GATGGTGTGG ATTTAGCCCA GGCCATTGAA CAAACACTAC GTACCTATCA ACTCAACGCT AAAGATAAAG GTATCGAACT CATCCAGGAT GTTGCCCCTG GCTTGCCACT AGTCTTAGGG AATTACGATT TACTATTACA AGTCTTAGCT AATTTGGTCG GCAATGCCCT CAAATTCACT CCCTCCGGTG GTAAAATCGC CATCCGTACC TACGTATTAC ACACTAAACC CAATTCCCCC AATCAGCCTA CCCAAGTGCG GATAGAAGTT TCTGATACCG GTATCGGTAT TGCCCCAGAA GACCAACAAG CGATTTTTGA CCGTTTCTTC CGGGTAGAAA ACAGAGTTCA CACTTTAGAA GGTACAGGTT TAGGGTTGTC GATTGTGCGA AATATTGTGG AACGACACCG CAGTAAAGTA AACCTAGTCA GTGAAGTAGG GGTAGGTACT ACTTTTTGGT TTGACTTAAT TTTGTTTGAA GACGAAGCAC CGAAAAAGAT GGCGGAGTCT GGTGAGGAGA AGGCAGCATT GCCAGCTAAT TAG
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Protein sequence | MLALLKTIRE AIANWWSEFT LQTKLLAAAT LVVSLVMSGL TFWAVNTIQQ DAQVNDTRFG RDLGLLLAAN VAPLVADHNL TEVAQFSQRF YSSTSSVRYM LYADETGKIF FGIPFWEPEV ENSLSIERRI QLPEEYPGEG EKPMVRQHMS PDGTVTDVFI PLIADKKYLG VLAIGINPNQ TAVISTNFTR DVTIAVFITI WVMVILAGVV NALTITKPIK ELLVGVKQIA AGNFKQRIDL PLGGELGELI LNFNEMAERL ERYEEQNIEE LTAEKAKLET LVSTIADGAV LIDNNMQVIL VNPTARHIFG WEGADDVVGS NVLHHLPPTV QMEITRPLYE MAAGECDSAE FRLTLNQPSN RTIRILLTTV LNLQRESIKG IAITVQDITR EVELNEAKSQ FISNVSHELR TPLFNIKSFI ETLHDYGEDL SIEERQEFLQ TVNHETDRLT RLVNDVLDLS KLESGRSYSF DGVDLAQAIE QTLRTYQLNA KDKGIELIQD VAPGLPLVLG NYDLLLQVLA NLVGNALKFT PSGGKIAIRT YVLHTKPNSP NQPTQVRIEV SDTGIGIAPE DQQAIFDRFF RVENRVHTLE GTGLGLSIVR NIVERHRSKV NLVSEVGVGT TFWFDLILFE DEAPKKMAES GEEKAALPAN
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