Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3208 |
Symbol | |
ID | 3680628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3988460 |
End bp | 3989512 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718558 |
Product | permease |
Protein accession | YP_323711 |
Protein GI | 75909415 |
COG category | [R] General function prediction only |
COG ID | [COG0701] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.757693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.643119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC TGAACAATGG TTTCACAATA TTTCTGAGTT TGCTAGTCGA GGCGATGCCC TTTTTGCTGC TTGGGGTTTT ATTCTCCAGT TTGCTGCTGT TTTTTGTAGA TGAGCGCAAA TTAGTAGAAA AAATGCCCAG AAATCCCTTA TTAGGTGCTT TAGTTGGCAG TATGGTCGGC TTTTTGTTTC CAGTCTGTGA ATGCGGAAAT GTGCCAGTAG CGCGGCGCTT GCTGATGCAA GGAGTACCTA CACCCGTAGC GGTTGGTTTT TTACTAGCAG CACCGACAAT TAACCCGATT GTGATTTGGG CAACATGGAC AGCATTTAGG GAACAACCAG AAATAGTAGT TTTACGTGTG ATATTTTCGC TCTTAATCGC CACAATTATC GGTTTTGTTT TCAGTTTTCA AGCGGACTTA GAACCCATAG TCCAACCAGC GATCGCTCGT TATTTAAAAT TTAATCCCCC AGCCAAACCA GAAACAAAAC GCCGGGGTAA ATACTCCACA ACAAAAGACA CGAATACCCC CAGTATGTTG CGTTCTGGGA CTTATATTTT AGGTGGTCGA GCAGGTGGTG TGCCAACACG ACTAGATGCT AACCTAGCCC CAACAAATGA GGCTAGCAGC AACAATAAAC CGTTGAGAGA TAAACTACGC CTGTTATTAG ATAACAGCAT CCAAGAATTG CGGGAGTTGG GTGCAGTCAT GGTAATTGGG AGTGCGATCG CCGCAGCCAT TCAAGTCCTA GCACCCCGTG AATTAATCCT CAGTCTAGGT TCTGGCCCGA TTACCTCAAT TCTCGTCATG CTGGTGTTAG CCGCAGTAGT ATCCATCTGT TCCACTGTCG ATTCATTTTT TGCCCTATCA TTCGCCGCCA CCTTCAGCAG TGGTTCATTA TTAGCCTTTC TCGTCTTTGG TCCCATGATT GACATCAAAA GTGTCGGCTT GATGTTATCC ATATTCAAAC CCAAGACGAT CTTCTACTTA TTTGCCTTAG CAGGGCTACT GACATTCTTA TTCACCCTTT TCATTAACTT GCACGTTATT TGA
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Protein sequence | MNQLNNGFTI FLSLLVEAMP FLLLGVLFSS LLLFFVDERK LVEKMPRNPL LGALVGSMVG FLFPVCECGN VPVARRLLMQ GVPTPVAVGF LLAAPTINPI VIWATWTAFR EQPEIVVLRV IFSLLIATII GFVFSFQADL EPIVQPAIAR YLKFNPPAKP ETKRRGKYST TKDTNTPSML RSGTYILGGR AGGVPTRLDA NLAPTNEASS NNKPLRDKLR LLLDNSIQEL RELGAVMVIG SAIAAAIQVL APRELILSLG SGPITSILVM LVLAAVVSIC STVDSFFALS FAATFSSGSL LAFLVFGPMI DIKSVGLMLS IFKPKTIFYL FALAGLLTFL FTLFINLHVI
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