Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3199 |
Symbol | |
ID | 3680619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3977354 |
End bp | 3979024 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637718549 |
Product | hypothetical protein |
Protein accession | YP_323702 |
Protein GI | 75909406 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00757676 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATC AATTTAAACT TCGGATAGGA CTTTGGAGTG CAGCTATTCT GACTGCTTTA GTCGGAGTAG TCAATTTATT ATCAGCAGTT ACTCCTAATT TATATGGTAG AAATCATTGG TTAAAAGAAT TTTTACCATT TGAAATTCGT GCTACTGGTC ATATATTTGC AGCCTTAACT GGCTTTATTT TATTAGCACT TGCCACTAAT TTATTGCGGC GTAAACGAGT TGCATGGATG CTCACTGTTA GTTTATTAAT TATTTCTATT ATTAGTCATT TATTGAAAGG ATGGGATTAC GAAGAAAGTA TTCTATCTGG AGTTTTGTTG CTGCAATTAA TCTCCATGCG TCATATTTTT ACGGCACAAT CTGACCGTCC TTCAGTGGCG CGGGGTGTGC GTGTATTAAT TGGGGCGCTG TTGTTTACAC TGGCTTATGG AACGGTGGGA TTTTACTTGT TAGATGACAA ATTCACCGAG AATTTCAATT GGGGTGGAGC TATTTTGCAA ACCTTAGCGA TGTTTTTCAC AGAAGATAAT TGGGGGTTAC AACCCAAGAG TAGATTTGGA GAATTTTTTG CCAATTCTAT CTATGTGATT GCAGCTAGTA CAATTACGTT TGCGGTGGTG ATGCTCTTAC AGCCAGTATT TTTACGCCAG ACAGCAACCA TCAGTGAGCA ACGAAAAGCA AAAGAAATAG TCCAGCAGTA TGGACGTTCA TCTTTAGCGC CTTTAACTCT TCTGAGTGAT AAGAGCTATT ATTTCAGCCC TTCTGGTCGC AGCGTCATTG CGTACGTTCC CAAAGGAAGA GGGGCGATCG CCTTGGGTGA TCCCATCGGC CCCATAGAAG ACCGCACAGA AGTAATTTCC AGCTTCCAAG AGTTTTGTCA ACGCAATGAT TGGTATCCAG CTTTTTACCA AACTTTACCT GATGATATTG ACTTGTACAG GTCTTTAGGG TTTAAGGTTC TCAAAATTGG TGAGGAGGCG ATCGTGGATT TGCCAACTTT TACTTTACAA GGCAAAGCTG GTAAAAACTT CCGTCCCTCC ATCAACCGTT TAACTAAACT TGGTTATCAA GTTAGTTTTC ATCAACCGCC AATTAGTAGT GAATTATTAC ACCAGCTGAA ATCTGTGAGT GATGAATGGC TGAGAATGGT ACAAGGTTCA GAAAAACACT TTTCTTTAGG ATGGTTTGAT GAAGTTTATC TGCGAGAGTG TGAAATTGCT GTTGTATATA CTCCCGACGG TAAAATTGAT GCTTTTACCA ACCTGTTACC AGAATATCAA CTCAACGAAG TCACTATTGA TTTGATGCGT CACCGCCATG CAATGGAAAA TGGCACGATG GATTTTCTGT TTACTTCTCT ACTACAACAT TTTAAAGATG AAGGTTACGA CAGCTTTAAC TTCGGTTTGT CGGCGTTAGC GGGGGTAGGT GAAAAACCAG AATCTCAGCG TTTAGAGAAA GGCTTGCGCT ATCTTTATGA GCATTTAAAC CGTTTTTATA ACTTTCAAGG CTTACACGCC TATAAAGAAA AATATCATCC GCGTTGGGAA GGACGCTATC TGGTGTATCC GAGTTTAACC GCCTTACCCG ATGTGGTTGT CGCCTTGATT CGTGCAGATT CAGGCGATCG CCTCCTCGAT TATTTCCAAC CAGGGGCTTA A
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Protein sequence | MNNQFKLRIG LWSAAILTAL VGVVNLLSAV TPNLYGRNHW LKEFLPFEIR ATGHIFAALT GFILLALATN LLRRKRVAWM LTVSLLIISI ISHLLKGWDY EESILSGVLL LQLISMRHIF TAQSDRPSVA RGVRVLIGAL LFTLAYGTVG FYLLDDKFTE NFNWGGAILQ TLAMFFTEDN WGLQPKSRFG EFFANSIYVI AASTITFAVV MLLQPVFLRQ TATISEQRKA KEIVQQYGRS SLAPLTLLSD KSYYFSPSGR SVIAYVPKGR GAIALGDPIG PIEDRTEVIS SFQEFCQRND WYPAFYQTLP DDIDLYRSLG FKVLKIGEEA IVDLPTFTLQ GKAGKNFRPS INRLTKLGYQ VSFHQPPISS ELLHQLKSVS DEWLRMVQGS EKHFSLGWFD EVYLRECEIA VVYTPDGKID AFTNLLPEYQ LNEVTIDLMR HRHAMENGTM DFLFTSLLQH FKDEGYDSFN FGLSALAGVG EKPESQRLEK GLRYLYEHLN RFYNFQGLHA YKEKYHPRWE GRYLVYPSLT ALPDVVVALI RADSGDRLLD YFQPGA
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