Gene Ava_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3199 
Symbol 
ID3680619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3977354 
End bp3979024 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content41% 
IMG OID637718549 
Producthypothetical protein 
Protein accessionYP_323702 
Protein GI75909406 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00757676 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAATC AATTTAAACT TCGGATAGGA CTTTGGAGTG CAGCTATTCT GACTGCTTTA 
GTCGGAGTAG TCAATTTATT ATCAGCAGTT ACTCCTAATT TATATGGTAG AAATCATTGG
TTAAAAGAAT TTTTACCATT TGAAATTCGT GCTACTGGTC ATATATTTGC AGCCTTAACT
GGCTTTATTT TATTAGCACT TGCCACTAAT TTATTGCGGC GTAAACGAGT TGCATGGATG
CTCACTGTTA GTTTATTAAT TATTTCTATT ATTAGTCATT TATTGAAAGG ATGGGATTAC
GAAGAAAGTA TTCTATCTGG AGTTTTGTTG CTGCAATTAA TCTCCATGCG TCATATTTTT
ACGGCACAAT CTGACCGTCC TTCAGTGGCG CGGGGTGTGC GTGTATTAAT TGGGGCGCTG
TTGTTTACAC TGGCTTATGG AACGGTGGGA TTTTACTTGT TAGATGACAA ATTCACCGAG
AATTTCAATT GGGGTGGAGC TATTTTGCAA ACCTTAGCGA TGTTTTTCAC AGAAGATAAT
TGGGGGTTAC AACCCAAGAG TAGATTTGGA GAATTTTTTG CCAATTCTAT CTATGTGATT
GCAGCTAGTA CAATTACGTT TGCGGTGGTG ATGCTCTTAC AGCCAGTATT TTTACGCCAG
ACAGCAACCA TCAGTGAGCA ACGAAAAGCA AAAGAAATAG TCCAGCAGTA TGGACGTTCA
TCTTTAGCGC CTTTAACTCT TCTGAGTGAT AAGAGCTATT ATTTCAGCCC TTCTGGTCGC
AGCGTCATTG CGTACGTTCC CAAAGGAAGA GGGGCGATCG CCTTGGGTGA TCCCATCGGC
CCCATAGAAG ACCGCACAGA AGTAATTTCC AGCTTCCAAG AGTTTTGTCA ACGCAATGAT
TGGTATCCAG CTTTTTACCA AACTTTACCT GATGATATTG ACTTGTACAG GTCTTTAGGG
TTTAAGGTTC TCAAAATTGG TGAGGAGGCG ATCGTGGATT TGCCAACTTT TACTTTACAA
GGCAAAGCTG GTAAAAACTT CCGTCCCTCC ATCAACCGTT TAACTAAACT TGGTTATCAA
GTTAGTTTTC ATCAACCGCC AATTAGTAGT GAATTATTAC ACCAGCTGAA ATCTGTGAGT
GATGAATGGC TGAGAATGGT ACAAGGTTCA GAAAAACACT TTTCTTTAGG ATGGTTTGAT
GAAGTTTATC TGCGAGAGTG TGAAATTGCT GTTGTATATA CTCCCGACGG TAAAATTGAT
GCTTTTACCA ACCTGTTACC AGAATATCAA CTCAACGAAG TCACTATTGA TTTGATGCGT
CACCGCCATG CAATGGAAAA TGGCACGATG GATTTTCTGT TTACTTCTCT ACTACAACAT
TTTAAAGATG AAGGTTACGA CAGCTTTAAC TTCGGTTTGT CGGCGTTAGC GGGGGTAGGT
GAAAAACCAG AATCTCAGCG TTTAGAGAAA GGCTTGCGCT ATCTTTATGA GCATTTAAAC
CGTTTTTATA ACTTTCAAGG CTTACACGCC TATAAAGAAA AATATCATCC GCGTTGGGAA
GGACGCTATC TGGTGTATCC GAGTTTAACC GCCTTACCCG ATGTGGTTGT CGCCTTGATT
CGTGCAGATT CAGGCGATCG CCTCCTCGAT TATTTCCAAC CAGGGGCTTA A
 
Protein sequence
MNNQFKLRIG LWSAAILTAL VGVVNLLSAV TPNLYGRNHW LKEFLPFEIR ATGHIFAALT 
GFILLALATN LLRRKRVAWM LTVSLLIISI ISHLLKGWDY EESILSGVLL LQLISMRHIF
TAQSDRPSVA RGVRVLIGAL LFTLAYGTVG FYLLDDKFTE NFNWGGAILQ TLAMFFTEDN
WGLQPKSRFG EFFANSIYVI AASTITFAVV MLLQPVFLRQ TATISEQRKA KEIVQQYGRS
SLAPLTLLSD KSYYFSPSGR SVIAYVPKGR GAIALGDPIG PIEDRTEVIS SFQEFCQRND
WYPAFYQTLP DDIDLYRSLG FKVLKIGEEA IVDLPTFTLQ GKAGKNFRPS INRLTKLGYQ
VSFHQPPISS ELLHQLKSVS DEWLRMVQGS EKHFSLGWFD EVYLRECEIA VVYTPDGKID
AFTNLLPEYQ LNEVTIDLMR HRHAMENGTM DFLFTSLLQH FKDEGYDSFN FGLSALAGVG
EKPESQRLEK GLRYLYEHLN RFYNFQGLHA YKEKYHPRWE GRYLVYPSLT ALPDVVVALI
RADSGDRLLD YFQPGA