Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3170 |
Symbol | |
ID | 3680726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3935211 |
End bp | 3936245 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718519 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_323673 |
Protein GI | 75909377 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.103544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGCA TAAGCCCATA TTCTCTTTCT AAAAAACCTC CCTTAATTTT GGTGGCTGAT GATGACAAGA CCATCCGAAT GCTGTTGCGT GAAGCTATGG AAAAAGAAGG CTATCGAGTA GTAGAGGTCA CAGATGGTAA ACAGTGTCTA GACGCTTATG AGGCTGTTAA ACCAGATATA GTGTTGCTAG ATGCTATGAT GCCTGTAATG GACGGTTTTA CGTGCTGTAA ACAATTACTA CAAATTGCCA GAAATAATCT AATTACCGCA TTGGCAAATC TAGATACTGA TTCCGGCTTA GGAAGTACGG TGATCTCCAG ATTGTGGGAA CGTACACCTA TCCTGATGAT CACTAGTTTA AACGATGCAG AGTCCGTAGA TCGTGCTTTT GAAGCTGGCG CAACTGACTA TATTACTAAG CCAATTCACT GGGCTGTGTT GCGTCAACGC TTACGAAGAT TACTACAGCA AGCACAAGTG TATAAACAGT TAGAAGCTGC GAACATGGCC TTACAGCACT TAGCCAATGT GGATGGTTTA ACTGGATTAG CTAATCGCCG CCGCTTTGAT AATTATTTAA ATACGCAGTG GATTAACTTG GTACAGAAAG GCGCTCCCTT GTCTTTGATT TTGTGTGATA TTGATTATTT TAAATTTTAT AATGACCAGT ACGGACATCC GGCTGGGGAT ATTTGTTTAC AAAAAGTAGG TGCGGTTTTA AGCTACAAAG CTCAGAAGCA TCAGGATTTA GTTGCCCGTT ATGGTGGCGA AGAATTTGCC GTGATTATGC CATATACTCA TGCAAAAGGA GCGATTTATG TTGCCCATAC CATACAAACC AGTGTCAGAG ATTTGCAAAT TACCCATGAT AAATCTGCTG TGAGTCAACA TATTACTCTC AGTATGGGTG TTGCTACCAT AACTCCTACC TGGGAATCTT CACCTTCTGA TTTGATTGCG GCGGCGGATA AAGCACTTTA TAAAGCGAAG GAATCAGGAC GAGACCGTAT TTGTCAATGG AAAGGTAGTC AATAG
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Protein sequence | MSGISPYSLS KKPPLILVAD DDKTIRMLLR EAMEKEGYRV VEVTDGKQCL DAYEAVKPDI VLLDAMMPVM DGFTCCKQLL QIARNNLITA LANLDTDSGL GSTVISRLWE RTPILMITSL NDAESVDRAF EAGATDYITK PIHWAVLRQR LRRLLQQAQV YKQLEAANMA LQHLANVDGL TGLANRRRFD NYLNTQWINL VQKGAPLSLI LCDIDYFKFY NDQYGHPAGD ICLQKVGAVL SYKAQKHQDL VARYGGEEFA VIMPYTHAKG AIYVAHTIQT SVRDLQITHD KSAVSQHITL SMGVATITPT WESSPSDLIA AADKALYKAK ESGRDRICQW KGSQ
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