Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3084 |
Symbol | |
ID | 3681006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3831583 |
End bp | 3833619 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637718429 |
Product | protoporphyrin IX magnesium-chelatase |
Protein accession | YP_323588 |
Protein GI | 75909292 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1239] Mg-chelatase subunit ChlI |
TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCGC CTACTATTAA TCCCACAATT ACTGCTTTTC CCTTGACAGC CGTAGTCGGT CAAGAAGCCA TCAAATTAGC GTTGCTGTTA GCAGCAGTCG ATCCTGGTTT GGGGGGAGTA GCGATCGCAG GTCGTCGTGG TACGGCAAAA TCTGTAATGG CTCGTGCTAT CCACGCCCTA CTCCCACCCA TTGAAGTTGT TAAAGGCTCA TTGAGCAATT GCGATCCCAA CCACCCAGAA GAATGGGATG ATTATCTATT GGCGGAGTAC GCTGACAAAA ATCTTCAAGA TGTCCCCACG GAAATTATTC CCTCGCCTTT TGTGCAGATT CCCCTTGGCG TGACAGAAGA CCGCCTCCTG GGTTCTGTGG ATGTGGAACA GTCGGTGAAG CAAGGAGACA CCATATTTCA GCCAGGGTTA CTCGCCACAG CTAACCGGGG TGTGCTGTAT GTGGATGAAA TCAATTTATT AGATGACCAA ATATCAAATC AGCTATTAAC AGTCCTCTCG GAAGGTCGTA ACCAAATTGA GCGTGAGGGG ATTAGTTTTC AGCATCCTTG CAAATCTCTG TTTATCGCCA CCTACAACCC AGAAGAAGGC GCATTACGGG AACATTTACT AGATAGAATT GCGATCGCTC TTTCGGCTGA CGGTGTTCTC GGTCTAGATC AAAGAGTAAC AGCTGTTGAG CAGGCGATCG CCTATTCCAA ATCCCCCCAA GATTTCCTCC AGCAATACAA CGAAGATTTA GACTCACTCA AAACCCAAAT CATCTTGGCG CGGGAATGGT TGAAGGAAGT CACAATCACT CAAGAACAAA TAGCCTACTT AGTAGACGAA GCCATTCGCG GCGTTGTCCA AGGTCATCGT GCCGAGTTAT TTGCCGTACG GGTTGCCAAA GCGGCGGCGG CTTTAGAAGG GCGGACAACC GTCAACGCTG AAGATTTGCG GCGGGCTGTG GAGTTGGTAA TTGTACCACG GGCAACAGTT ATCCAGACAC CACCACCAGA CCAGCCACCG CCACCACCCC CGCCACCACC ACCACAAAGC CAGGACGAGT CAGAGGAAGA ACAAGAAGAA GAACAGGAAA ACAACGAAGA TAAACCAGAG GAACAAGAAC AGCCAGAACC CCCTGATATT CCCGAAGAAT TTATCTTCGA CCCAGAAGGG GTAATTTTAG ATAACAGTGT TCTGTATTTT GCTCAGATGG CACAACGCCA AGGTAAATCT GGTAGTCGGA GTATCATCTT TTCCGACGAC CGGGGGCGCT ATATTAAGCC TATGTTGCCT AAGGGGAAAG TGCGACGTAT TGCAGTAGAT GCCACTCTCA GGGCAGCTGC ACCCTATCAA AAAGCACGAC GAGAAAGACA GCCTGATAAA AAAGTTATTG TTGAGCAAGG TGACATTCGC TCAAAACGCT TGGTACGCAA AGCTGGGGCG TTGGTTGTTT TTGTGGTAGA TGCTTCTGGC TCAATGGCCT TAAATCGGAT GCAGTCAGCT AAAGGCGCAG TGATGCAACT ACTCACCGAA GCTTATCAAA ACCGTGACCA AGTAGCTTTG ATTCCCTTCC GGGGAGAACA AGCAGAGGTA TTACTACCAC CAACTCGTTC TATTGCCTTA GCACGGAACC GACTGGAAAG ATTACCCTGT GGTGGTGGTT CGCCCCTAGC TCATGGTTTA ACCCAAGCTG TACGCGTCGG TGTCAATGCC CAAATGGGTG GAGATGTTGG ACAAGTTGTC ATTGTAGCTA TCACCGACGG CCGGGGTAAT ATTCCCCTAT CACGTTCTTT GGGTGAACCA CAAGAATCAG GAGAAAAACC AGATATCAAA GCGGAACTAT TAGACATCGC CGCGAGAATC CGGGCTTTGG GGATGCAGTT ACTCGTTATC GATACCGAAA GTAAATTTGT CTCTACCGGC TTTGCTAAGG AATTAGCGAA AACCTCAGGA GGTAAATATT ATCATCTACC TAAAGCCACC GATAAAGCCA TTGCTGCTAT GACTAAAGGA GCGATCGCTG ATTTAAAATC TCGGTAG
|
Protein sequence | MPAPTINPTI TAFPLTAVVG QEAIKLALLL AAVDPGLGGV AIAGRRGTAK SVMARAIHAL LPPIEVVKGS LSNCDPNHPE EWDDYLLAEY ADKNLQDVPT EIIPSPFVQI PLGVTEDRLL GSVDVEQSVK QGDTIFQPGL LATANRGVLY VDEINLLDDQ ISNQLLTVLS EGRNQIEREG ISFQHPCKSL FIATYNPEEG ALREHLLDRI AIALSADGVL GLDQRVTAVE QAIAYSKSPQ DFLQQYNEDL DSLKTQIILA REWLKEVTIT QEQIAYLVDE AIRGVVQGHR AELFAVRVAK AAAALEGRTT VNAEDLRRAV ELVIVPRATV IQTPPPDQPP PPPPPPPPQS QDESEEEQEE EQENNEDKPE EQEQPEPPDI PEEFIFDPEG VILDNSVLYF AQMAQRQGKS GSRSIIFSDD RGRYIKPMLP KGKVRRIAVD ATLRAAAPYQ KARRERQPDK KVIVEQGDIR SKRLVRKAGA LVVFVVDASG SMALNRMQSA KGAVMQLLTE AYQNRDQVAL IPFRGEQAEV LLPPTRSIAL ARNRLERLPC GGGSPLAHGL TQAVRVGVNA QMGGDVGQVV IVAITDGRGN IPLSRSLGEP QESGEKPDIK AELLDIAARI RALGMQLLVI DTESKFVSTG FAKELAKTSG GKYYHLPKAT DKAIAAMTKG AIADLKSR
|
| |