Gene Ava_3084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3084 
Symbol 
ID3681006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3831583 
End bp3833619 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content49% 
IMG OID637718429 
Productprotoporphyrin IX magnesium-chelatase 
Protein accessionYP_323588 
Protein GI75909292 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID[TIGR02031] magnesium chelatase ATPase subunit D 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC CTACTATTAA TCCCACAATT ACTGCTTTTC CCTTGACAGC CGTAGTCGGT 
CAAGAAGCCA TCAAATTAGC GTTGCTGTTA GCAGCAGTCG ATCCTGGTTT GGGGGGAGTA
GCGATCGCAG GTCGTCGTGG TACGGCAAAA TCTGTAATGG CTCGTGCTAT CCACGCCCTA
CTCCCACCCA TTGAAGTTGT TAAAGGCTCA TTGAGCAATT GCGATCCCAA CCACCCAGAA
GAATGGGATG ATTATCTATT GGCGGAGTAC GCTGACAAAA ATCTTCAAGA TGTCCCCACG
GAAATTATTC CCTCGCCTTT TGTGCAGATT CCCCTTGGCG TGACAGAAGA CCGCCTCCTG
GGTTCTGTGG ATGTGGAACA GTCGGTGAAG CAAGGAGACA CCATATTTCA GCCAGGGTTA
CTCGCCACAG CTAACCGGGG TGTGCTGTAT GTGGATGAAA TCAATTTATT AGATGACCAA
ATATCAAATC AGCTATTAAC AGTCCTCTCG GAAGGTCGTA ACCAAATTGA GCGTGAGGGG
ATTAGTTTTC AGCATCCTTG CAAATCTCTG TTTATCGCCA CCTACAACCC AGAAGAAGGC
GCATTACGGG AACATTTACT AGATAGAATT GCGATCGCTC TTTCGGCTGA CGGTGTTCTC
GGTCTAGATC AAAGAGTAAC AGCTGTTGAG CAGGCGATCG CCTATTCCAA ATCCCCCCAA
GATTTCCTCC AGCAATACAA CGAAGATTTA GACTCACTCA AAACCCAAAT CATCTTGGCG
CGGGAATGGT TGAAGGAAGT CACAATCACT CAAGAACAAA TAGCCTACTT AGTAGACGAA
GCCATTCGCG GCGTTGTCCA AGGTCATCGT GCCGAGTTAT TTGCCGTACG GGTTGCCAAA
GCGGCGGCGG CTTTAGAAGG GCGGACAACC GTCAACGCTG AAGATTTGCG GCGGGCTGTG
GAGTTGGTAA TTGTACCACG GGCAACAGTT ATCCAGACAC CACCACCAGA CCAGCCACCG
CCACCACCCC CGCCACCACC ACCACAAAGC CAGGACGAGT CAGAGGAAGA ACAAGAAGAA
GAACAGGAAA ACAACGAAGA TAAACCAGAG GAACAAGAAC AGCCAGAACC CCCTGATATT
CCCGAAGAAT TTATCTTCGA CCCAGAAGGG GTAATTTTAG ATAACAGTGT TCTGTATTTT
GCTCAGATGG CACAACGCCA AGGTAAATCT GGTAGTCGGA GTATCATCTT TTCCGACGAC
CGGGGGCGCT ATATTAAGCC TATGTTGCCT AAGGGGAAAG TGCGACGTAT TGCAGTAGAT
GCCACTCTCA GGGCAGCTGC ACCCTATCAA AAAGCACGAC GAGAAAGACA GCCTGATAAA
AAAGTTATTG TTGAGCAAGG TGACATTCGC TCAAAACGCT TGGTACGCAA AGCTGGGGCG
TTGGTTGTTT TTGTGGTAGA TGCTTCTGGC TCAATGGCCT TAAATCGGAT GCAGTCAGCT
AAAGGCGCAG TGATGCAACT ACTCACCGAA GCTTATCAAA ACCGTGACCA AGTAGCTTTG
ATTCCCTTCC GGGGAGAACA AGCAGAGGTA TTACTACCAC CAACTCGTTC TATTGCCTTA
GCACGGAACC GACTGGAAAG ATTACCCTGT GGTGGTGGTT CGCCCCTAGC TCATGGTTTA
ACCCAAGCTG TACGCGTCGG TGTCAATGCC CAAATGGGTG GAGATGTTGG ACAAGTTGTC
ATTGTAGCTA TCACCGACGG CCGGGGTAAT ATTCCCCTAT CACGTTCTTT GGGTGAACCA
CAAGAATCAG GAGAAAAACC AGATATCAAA GCGGAACTAT TAGACATCGC CGCGAGAATC
CGGGCTTTGG GGATGCAGTT ACTCGTTATC GATACCGAAA GTAAATTTGT CTCTACCGGC
TTTGCTAAGG AATTAGCGAA AACCTCAGGA GGTAAATATT ATCATCTACC TAAAGCCACC
GATAAAGCCA TTGCTGCTAT GACTAAAGGA GCGATCGCTG ATTTAAAATC TCGGTAG
 
Protein sequence
MPAPTINPTI TAFPLTAVVG QEAIKLALLL AAVDPGLGGV AIAGRRGTAK SVMARAIHAL 
LPPIEVVKGS LSNCDPNHPE EWDDYLLAEY ADKNLQDVPT EIIPSPFVQI PLGVTEDRLL
GSVDVEQSVK QGDTIFQPGL LATANRGVLY VDEINLLDDQ ISNQLLTVLS EGRNQIEREG
ISFQHPCKSL FIATYNPEEG ALREHLLDRI AIALSADGVL GLDQRVTAVE QAIAYSKSPQ
DFLQQYNEDL DSLKTQIILA REWLKEVTIT QEQIAYLVDE AIRGVVQGHR AELFAVRVAK
AAAALEGRTT VNAEDLRRAV ELVIVPRATV IQTPPPDQPP PPPPPPPPQS QDESEEEQEE
EQENNEDKPE EQEQPEPPDI PEEFIFDPEG VILDNSVLYF AQMAQRQGKS GSRSIIFSDD
RGRYIKPMLP KGKVRRIAVD ATLRAAAPYQ KARRERQPDK KVIVEQGDIR SKRLVRKAGA
LVVFVVDASG SMALNRMQSA KGAVMQLLTE AYQNRDQVAL IPFRGEQAEV LLPPTRSIAL
ARNRLERLPC GGGSPLAHGL TQAVRVGVNA QMGGDVGQVV IVAITDGRGN IPLSRSLGEP
QESGEKPDIK AELLDIAARI RALGMQLLVI DTESKFVSTG FAKELAKTSG GKYYHLPKAT
DKAIAAMTKG AIADLKSR