Gene Ava_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3080 
Symbol 
ID3681060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3827879 
End bp3828658 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content42% 
IMG OID637718425 
Producthypothetical protein 
Protein accessionYP_323584 
Protein GI75909288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.143929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAG TGCCAAACAT TACACGCGAA ATATTAGCCG ATGACCCCTT TCCGCGGTTT 
GATGAATGGC TAGACCAAGT AGAACAAGTG CTGGAACAAA ATACCGCTTT GCTAATGTTA
GACGAGTTTG AGGCATTAGA CAGCGCTATA AATAGGGGGC GCTTTGATGA AGAAGATGTT
TTAGGAATGC TGCGCCACTT AATCCAACAT CGTCCCCGCT TCAAGATGTT ATTAGCTGGC
TCTCATACTA TTGAAGAATA TCAGCGTTGG GCTAGTTATT TAATTAACGT CCAAGTAGTG
CATATCTCTT ATTTAAAGGA AGAAGAAGCA CGACAATTAA TTGAACATCC CGTCAAATAT
TTTACTCTCC GCTATGAACC AGAGGCAGTT GAGCGAGTTT TGCAACTTAC CCGTTGTCAC
CCATTCTTAA TACAGCTACT CTGCGGAGAA ATTATCGTCT TGAAAAATGA ACAAGACCCC
TCTATCCGGC GCTTAACAAG TTTAGAAGAT GTGGAAGCAG CCATACCAGA GGCTTTACAG
AGTGGTGGCT TTTTCTTTGC TGATATTCAA AACAACCAAG TAGATGCAAA TGGACGGGAG
GTTTTACGTT TAATTGCAGC TCAGGGGGAA GGGGAAATTG TTAGCAAGTT CACTTTATCA
GAACAATTTC CCGATGTTTG GGAAAGAACG ATCGCCCTAT TATTACAACA AGAGTTAATT
GAAGAAGTTG CAGATAGTTA TCGCTTCCAG GTGGAGTTAA TTCGACGGTG TTTTGTTTAG
 
Protein sequence
MMSVPNITRE ILADDPFPRF DEWLDQVEQV LEQNTALLML DEFEALDSAI NRGRFDEEDV 
LGMLRHLIQH RPRFKMLLAG SHTIEEYQRW ASYLINVQVV HISYLKEEEA RQLIEHPVKY
FTLRYEPEAV ERVLQLTRCH PFLIQLLCGE IIVLKNEQDP SIRRLTSLED VEAAIPEALQ
SGGFFFADIQ NNQVDANGRE VLRLIAAQGE GEIVSKFTLS EQFPDVWERT IALLLQQELI
EEVADSYRFQ VELIRRCFV