Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3012 |
Symbol | |
ID | 3681189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3735617 |
End bp | 3736768 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637718358 |
Product | lipolytic protein |
Protein accession | YP_323517 |
Protein GI | 75909221 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGATT CTTATCTGTT GGCAGTAGGC TTGTTAACAG GATTGACACT ACCAGCATCA GCTCTACCAC AGATATCGAA TATCCTGCCA GATAATTCTA GTTTCGCATC GGATATAAAA CAAAGCTCAC CGGAGGTGAT TACCGAGGAT ATATCTTTAT CCCCATTCAG TAACCAACTA TCACAGGCGT TTGAGAGCTT ACCACAGGAT GCAGATGAAA AAAGCTTGCC TACGCTTTTT AACGTATCCT TCCCCGAATT TAGCAGTCAA CCTTTGTCAC CATCTAAAGC CTCTCAATCA ACGAATGGCG AGAAAAATAT TCCCGGTTCT CATAACCCTT TACTGCAATT TACCAATCAA GAATCATCAA CACCCATAAA CTCATTCTTT AACCTCAATC CCCAGCCGAC TAACCAACTA TTAACTTCTG GTAATCAACT TTACTATTAC CGATTAGCTG CACTGAAAAC AGGTCAGATT TACACACGCC AGGATGGTGA TAGTGACCAA TCATTACGAG ATGCGACTCA AAAGCAGCAA CTAACTTATG ATGATTGGAA AAGTCTATTG GCTCTAGAAG CTAAAGCGAT CGCTCAAGGT CAAGGTAAAA ACCGTCTCAG TATCCTTGTT GGGGATTCCT TGAGTATGTG GTTTCCTAGA GAAAAGCTAC CATCTGGTAA GTTGTGGCTA AATCAAGGTA TATCTGGAGA TACTTCCACT GGTATCGCCA ATAGATTGAC AGCTTTTTCA TATACGCGTC CTGATGCTAT CTACATCATG GCTGGGATTA ATGACCTACG AAAAGGAACC AGCGATGAAG TCATTTTGCG TAATCACCGG CAGATGGTTC GGAGATTACG GCAGTCTCAC CCCAGGACTC AGATTTTTAT ACAATCTATA TTACCTACTA ACCTACCAAC AATTTCTAAT AGTCGGATTC GGGAAATTAA TACAAAACTG GCTCAAATTG CTAAGAAAGA AAAAGTAAAT TATTTAGATA TTCATACTTG GTTTGCAGAC GGTGATGGCA ATTTACGTTC TGATTTAACC ACAGATGGCT TGCATTTGTC GGCTGATGGT TATGATGTGT GGCGATTTGC TATCCAACAG GTAGAATTCA AACTCTCTCA AAACAAAAAT GTTGACCGTT AA
|
Protein sequence | MRDSYLLAVG LLTGLTLPAS ALPQISNILP DNSSFASDIK QSSPEVITED ISLSPFSNQL SQAFESLPQD ADEKSLPTLF NVSFPEFSSQ PLSPSKASQS TNGEKNIPGS HNPLLQFTNQ ESSTPINSFF NLNPQPTNQL LTSGNQLYYY RLAALKTGQI YTRQDGDSDQ SLRDATQKQQ LTYDDWKSLL ALEAKAIAQG QGKNRLSILV GDSLSMWFPR EKLPSGKLWL NQGISGDTST GIANRLTAFS YTRPDAIYIM AGINDLRKGT SDEVILRNHR QMVRRLRQSH PRTQIFIQSI LPTNLPTISN SRIREINTKL AQIAKKEKVN YLDIHTWFAD GDGNLRSDLT TDGLHLSADG YDVWRFAIQQ VEFKLSQNKN VDR
|
| |