Gene Ava_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2965 
Symbol 
ID3681335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3675528 
End bp3676409 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content45% 
IMG OID637718312 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_323471 
Protein GI75909175 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC GAGGTAAAGT AGCCCTGGTG ACTGGGGCTT CCCGTGGAAT TGGGCGAGCG 
ATCGCTTTAG AATTAGCACA ACAAGGAATA CACAGATTAA TTTTAGTGGC ACGCGATCGC
CAAAAGTTAA GAGAAGTCGC CCAGGAAGTG GAGGCTATGG GAGTCCAAGC CACAACATTG
GCGATTGATT TAACGCAAGC CACCGAGGTA AACATTGCCA TAGCGCAACT ATGGCGCAAT
TACGGCCCCA TTCACTTACT TGTTAACTGT GCAGGCGTTG CATACCAAAG TTCATTCTTG
CAATCAAAAC TTCCCCAAGT TCAAGAAGAA CTTTCTGTAA ACTTATTGGG AATGTATACC
CTCACCAGCC TCATCGCCAA ACGTATGGCT AGCCAAAGAC AAGGAACTAT TGTCAATGTT
TCCAGCTTAA TGGGGAAAGT AGCTGCACCA ACAATGGCGA CTTATTCAGC CACAAAGTTT
GCTATCTTAG GCTTTACCCA AGCCTTGCGC CGCGAACTTG CTGAGTACAA CATCCAGGTG
AAGGCGTTAT TACCATCCCT CACCGACACA GATATGGTGC GTGACTTAAA ACTATTTCGC
TGGGTGATTC CCATGACACC CCAGGAAGTA GCCAAAGCGT TAATTACTGG ACTAGAAAAA
GATGCACCAG AAATTTTAGT AGGATGGCAA AGTCATTTAG CCGTGTGGTG TCAACGTTTA
GCCCCTTGGT TACTGGAATT GGTTTTAAAA ATTGCCACAC CACCAGCTAT TAGACAACAA
CAATCTGACG AAAACTTGAG CTTTTGGGCA AAAATCCAGC GTTTTGGCGA TTTCTTCTTT
TCTGGAAACA AGTTTCCCTT CGTATTCGCC CGTAAAACCT GA
 
Protein sequence
MNIRGKVALV TGASRGIGRA IALELAQQGI HRLILVARDR QKLREVAQEV EAMGVQATTL 
AIDLTQATEV NIAIAQLWRN YGPIHLLVNC AGVAYQSSFL QSKLPQVQEE LSVNLLGMYT
LTSLIAKRMA SQRQGTIVNV SSLMGKVAAP TMATYSATKF AILGFTQALR RELAEYNIQV
KALLPSLTDT DMVRDLKLFR WVIPMTPQEV AKALITGLEK DAPEILVGWQ SHLAVWCQRL
APWLLELVLK IATPPAIRQQ QSDENLSFWA KIQRFGDFFF SGNKFPFVFA RKT