| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2935 |
|---|
| Symbol | |
|---|
| ID | 3681364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3639625 |
|---|
| End bp | 3640227 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637718282 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_323441 |
|---|
| Protein GI | 75909145 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.962071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATG AACTAATTAA TGGCGTTGCT CTGGCGGATA CACCAGAGAA ACTGGTAAAA
GCAGTACAGG AATTGGCACT AGCCAAAGAT GTAGCTGCAA TTCCCACTTT AATAGCTGTG
TTTGGTTATA ACAACCCAAC GGCAGCAGCA ATCGCCTCTA CTGCCTTGGT GCAGATGGGA
GAAGTAGCAG TCCCCCATTT ACTCACTCAA ATAGATGACT ATAACTATGG CGCACGGGCT
TATTCGATTC GCACACTCGC GGCGATCGCT GATCCCCGTG CTTTAGATGT ATTAATCGAT
GCTGCTGCTA CAGACTTTGC TCCTAGTGTC CGCCGGGCTG CGGCTAAAGG ATTAGGGAAC
TTACATTGGC ACAAGCTAGA TTTTCCCGAC AACCAAACAG CACCCAAAAA AGCCTTGGAA
ACACTGCTGT TTATTTCTCA AGATGCAGAA TGGTCGATTC GCTATGCAGC GATCGTCGGT
CTGCAAGGTT TAGTAAACAT ACCCGATTTA CAACAGCCCA TCCATACTAG ACTCAAAGAA
ATGCTGGTAA CTGATACCGA AAAGGCAGTC CGCGCCCGCA TTCTATTGGC TCAAAGTCAA
TAG
|
|---|
| Protein sequence | MTDELINGVA LADTPEKLVK AVQELALAKD VAAIPTLIAV FGYNNPTAAA IASTALVQMG
EVAVPHLLTQ IDDYNYGARA YSIRTLAAIA DPRALDVLID AAATDFAPSV RRAAAKGLGN
LHWHKLDFPD NQTAPKKALE TLLFISQDAE WSIRYAAIVG LQGLVNIPDL QQPIHTRLKE
MLVTDTEKAV RARILLAQSQ
|
|---|
| |