Gene Ava_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2923 
Symbol 
ID3681391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3628368 
End bp3629513 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content35% 
IMG OID637718270 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_323429 
Protein GI75909133 
COG category[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0474804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TTCCGATTAC TAGATACAGA TTTTTTCAGA AAATACAACC CCTATCTTTA 
TTAAAAAAAA TAACTGGGAA GACAATCACT GGTTGTTTAC AAGTATTTAG TACTTCAGGT
ACCTGGTCTA TATACGTAGA AGAAGGTAAG CTCATTTATG CCTGCTATTC AGAGAGGATG
TTTGAACCTC TTTATAGACA TTTAGGAAAC TTAAGTCCAC AAATTGCCAC CCTACCTAAA
GAAATTAACG AGCAGTTAAG AGCAATATTT GAAACAGGAA TTGAAAATCA AGCTATACCC
AATCCTGATT ATTTAGCTAT TTGTTGGTTA GTCAATCAGA AATATATTAG TTCGTCACAA
GCAGCCGTCC TGATAGAACA ATTAGCATTA GAAGTAGTAG AATCATTTCT CATGCTGGAA
GAAGGAAGTT ATGAATTTAT TCCTGAAAGT TTTTTAGATG ATTTACCTAA ATTCTGCTAT
CTGAATGTTC GGTTATTAGT CGAACAGTGT CAACAGCGTG GGCGTGTTCC TGAAGCATTC
CGCAGAGAAG CATCTAGTCA AGAGATATCT TCATCTACAG AAAGTAACCA AATACCAGTT
AACAGCAAAC GTAGCACCAA ATTTACACCG CCTCCGCACA CTCAGCCTAA GCCTAAGCCT
GAGCCAAGCT TACCGCAAAT AAATACTAAT AAATCTATAG AATATTCAAA GCGATATGTA
TCTCAATCTA ATACTATTAA TCACGGATAT TCACAGATAT CTCCCACATC GGCTGATAAG
AAGATATATA CAATCTTTTG TATTGATGAT GATCCAACTG TGCTAAATAA GATTAAAAAC
TTTTTAGATG ATCAAATATT TGCAGTAATT GGCGTTACAG ATTCTCTAAA AGCATTAATG
GAAATTCTCT GTACAAAGCC AGATATCATT TTAATCAACG TTGATATGCC TGATTTGGAC
GGCTATGAGT TATGTTCTTT ATTACGTAAA CATTCATATT TCAAAAACAC CCCTGTAATT
ATGGTGACAG CAAAAGCTGG ACTAGTCAAT AGAGCGAGAG CCAAGATAGT CAGAGCATCA
GGTCACTTAA CTAAACCTTT TAATCAAGGT GATTTGCTAA AAGTAATTTT TAAACACATT
ACCTAA
 
Protein sequence
MKTLPITRYR FFQKIQPLSL LKKITGKTIT GCLQVFSTSG TWSIYVEEGK LIYACYSERM 
FEPLYRHLGN LSPQIATLPK EINEQLRAIF ETGIENQAIP NPDYLAICWL VNQKYISSSQ
AAVLIEQLAL EVVESFLMLE EGSYEFIPES FLDDLPKFCY LNVRLLVEQC QQRGRVPEAF
RREASSQEIS SSTESNQIPV NSKRSTKFTP PPHTQPKPKP EPSLPQINTN KSIEYSKRYV
SQSNTINHGY SQISPTSADK KIYTIFCIDD DPTVLNKIKN FLDDQIFAVI GVTDSLKALM
EILCTKPDII LINVDMPDLD GYELCSLLRK HSYFKNTPVI MVTAKAGLVN RARAKIVRAS
GHLTKPFNQG DLLKVIFKHI T