Gene Ava_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2905 
Symbol 
ID3681410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3610781 
End bp3611884 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content34% 
IMG OID637718250 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_323411 
Protein GI75909115 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5039] Exopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000128361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAGTC TCTCTAGCGC AGAAACCATT AGAGCATCTC TTCACAATGC TTTAGGAAAA 
ATAGAAAGTT TTAAATCGTG TGCGTTACTT GATTATCCAG ATCATCCTAA TATCGGAGAT
CATTTAATAT GGCTTGGTGG GGTAATTTAT CTGACCAATG TTATGAAAAC CCAGATTAAA
TATACTTGTA GCCTACATAA TTTCTCTCCA AAAACGTTGG AAGATAATAT TGGTAAATCA
CCCATAGTGT TTCATGGGGG TGGCAATTTA GGAGATTTAT GGACTGAACA ACAAAAATTT
AGAGAAGGGA TTATTTCCAA ATACCGCGAT CGCCCGATTG TTATTCTACC CCAAAGTTTA
TATTTTAGGC ATGAGGTTAA CTTAATAAAA ACAGCGAATA TATTTAATTC TCATCCTAAT
TTAACTATAT TTCTGCGTGA TGAACGTAGT TATAAAATAG CAAGAGAAGC TTTTGATAAG
TGCCAAGTAT TTAAGGCACC TGACATGGCT TTTCAGATGA CGGACTTACA AGATATTTTC
CATATTCAAA ATAATAAATC ATCAATATTG TATCTTTCTA GAAAAGATAG AGAAATCAAT
CAAAAGCAAT CAGAGAATAT TTTTGATTTG CCTAATTTAG TAGTTGAAGA TTGGATTGCC
TATGAATGGA AGTTTGGACA TCCTACGAAA AAATTAGCCA AGTACGTTTC TACTTTATAT
AGAGAGGTAT GGCAAAGGGG ACTAGCTACT CCAATTGAAT GGAATTCTCG ACAAAAATGG
CAAAATTCGT ATCCATATGA AGTTGAATTC AATCATGTAT ATCAACCATC CATACATCAA
CTATCATGGA GTTTAATGCA CAGTGGTGTT TATCAATTAA AGCAACATAG ACTAGTTATA
ACCAATCGCT TACATGGACA TATTATTTGT GTCCTTTTCA ATATACCTCA TGTATTTTTA
CCAAACAGCT ATTACAAGAA TGAGGCTTTC TACGAAGAAT GGACAAAAGA AATTCCTGAT
TGCAGGTTTA TTAAGGATAC TTCCGAAGTA AAAATTGCTG TTGAAGAGCT ATTAGCGTCA
AGTACGGGTA AAGCAATCAA TTAA
 
Protein sequence
MMSLSSAETI RASLHNALGK IESFKSCALL DYPDHPNIGD HLIWLGGVIY LTNVMKTQIK 
YTCSLHNFSP KTLEDNIGKS PIVFHGGGNL GDLWTEQQKF REGIISKYRD RPIVILPQSL
YFRHEVNLIK TANIFNSHPN LTIFLRDERS YKIAREAFDK CQVFKAPDMA FQMTDLQDIF
HIQNNKSSIL YLSRKDREIN QKQSENIFDL PNLVVEDWIA YEWKFGHPTK KLAKYVSTLY
REVWQRGLAT PIEWNSRQKW QNSYPYEVEF NHVYQPSIHQ LSWSLMHSGV YQLKQHRLVI
TNRLHGHIIC VLFNIPHVFL PNSYYKNEAF YEEWTKEIPD CRFIKDTSEV KIAVEELLAS
STGKAIN