Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2858 |
Symbol | |
ID | 3681461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3549614 |
End bp | 3551167 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637718205 |
Product | secretion protein HlyD |
Protein accession | YP_323366 |
Protein GI | 75909070 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit [TIGR02971] ABC exporter membrane fusion protein, DevB family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTG AGACAACACA CCCCGTAGAT TCATCAATAT TGCTGCCACA GACCAAGAAA AAAGCTAAAA TCAATTGGCT TTCTTGGCTG ATTGTCTTAG GGATTGTGGG TGGTATCGGC TACGCAATTT ATTACCAATT AACAGTAGTT CCTCGTCAGC AAGCTAGAAG CAGGGTACTT ACACAGGCTG TAGAAAGGCA GACTCTACCA ATTACAGTTT CCGCAAATGG AACCGTCAAA CCTGAACGGT CAGTCAACCT CAGCCCGAAG AATTCTGGCA TACTCAAACA ATTGCTAGTC AAGGAAGGGG ATGTTGTTAA ACAAGGGCAA GTTTTAGCCT ACATGGATGA TTCCAACTTG CGAGGACAAC TGATCTCTGC ACAGGGGCAG TTAGCTCAAG CTGAGGCAAA CTTGCAAAAG GTACAAGCGG GGAATCGTCC TCAGGATATC GGTCAATCTC AGGCTCAGTT AGATGAAGCC TTGGCAAACT TACGTAAGCT AGAGACAGGT AATCGACCAC AGGATATTGC TCAAGCCCAA GCACGCTTAA AAAGCGCACA AGCCAGCTTA ACTCAAGCAG AAGACGATTT ACGCCGGAAT CAGCAACTTT ATAATGACGG GGCGATCGCT CTACAAGTCG TCAATCAAAA ACGTACAGAA CGCGATAGCG CTCAAGCCCA AGTCAATGAA GCCCAGCAAG CATTGGCCTT ACAACAAGCC GGCTCACGCC AAGAAGACAT CGAGCAAGCA AGGGCGACAG TCAGACAGAG ACAGGAAGCC TTGGCGCTGC TAAAAGCGGG GAACCGCCGA GAAGATATTG ATGCAGCCAG AGCGCAGGTA ACATCTGCCC GTGGTTCCCT ACAAAATACC CAAGCGCAAA TCAATGACAC CGTACTGCGT GCGCCATTTG ATGGTATTGT GACCCAAAAA TACGCTGATC CAGGCGCTTT TGTTACACCC ACAACCTCAG GAAGTGCTGT TTCTTCCGCC ACCTCTTCTT CAATTTTGGC GTTAGCCTCA CGTAATGAAG TTGTAGCCAA TTTATCTGAA TCGAATATTG CCAAAATCCG GTTAGGTCAA AAAGTGACAA TTACCGCAGA TGCCTATCCA GGTAGAACCT TTGAAGGTAA AGTCAGTCAG ATTGCTGCTC AAGCCACAGT AGAGCAGAAT GTCACCAGTT TTCAGGTCAA AGTATCATTG AGCGATTCTC AAAGATTATT GCGATCGGGG ATGAATGTGT CAGCAGAATT CCAAGCTGGT CAATTAGATA ATGCTTTAGT AGTACCCACA GCCGCAGTTG TGCGCCGGGA AAATGCCACA GGTGTTTTTG TCTCAGGAGC CAATAACCGA CCAGTTTTTA CTCCGATTAA AACTGGAGCG ACTGTTAATA GTTTTACTGA AGTCCAATCT GGCTTGAAAG GTAACGAAAG AGTCCTGCTC AGTTTCCCTC CAGGAATGCG ACCCCAATCA ACACCAAGAG GAGGAGTTTT TCCAGGGGTA GGCGGCGGTG GTGGTCGTTC TTCCGGTGGT CGTTCGCGTA ACGCTGCACC TTAA
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Protein sequence | MTTETTHPVD SSILLPQTKK KAKINWLSWL IVLGIVGGIG YAIYYQLTVV PRQQARSRVL TQAVERQTLP ITVSANGTVK PERSVNLSPK NSGILKQLLV KEGDVVKQGQ VLAYMDDSNL RGQLISAQGQ LAQAEANLQK VQAGNRPQDI GQSQAQLDEA LANLRKLETG NRPQDIAQAQ ARLKSAQASL TQAEDDLRRN QQLYNDGAIA LQVVNQKRTE RDSAQAQVNE AQQALALQQA GSRQEDIEQA RATVRQRQEA LALLKAGNRR EDIDAARAQV TSARGSLQNT QAQINDTVLR APFDGIVTQK YADPGAFVTP TTSGSAVSSA TSSSILALAS RNEVVANLSE SNIAKIRLGQ KVTITADAYP GRTFEGKVSQ IAAQATVEQN VTSFQVKVSL SDSQRLLRSG MNVSAEFQAG QLDNALVVPT AAVVRRENAT GVFVSGANNR PVFTPIKTGA TVNSFTEVQS GLKGNERVLL SFPPGMRPQS TPRGGVFPGV GGGGGRSSGG RSRNAAP
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