Gene Ava_2787 details

Gene Information

• Locus tag: Ava_2787
• Symbol: thrS
• ID: 3681720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anabaena variabilis ATCC 29413
• Kingdom: Bacteria
• Replicon accession: NC_007413
• Strand: +
• Start bp: 3439086
• End bp: 3440933
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637718133
• Product: threonyl-tRNA synthetase
• Protein accession: YP_323295
• Protein GI: 75908999
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.100504
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTTCAGC AGCCAATGTC GCCTAATCAA GACCCCAACA ACCAGCCAGA ACAACCAGAA 
AAAATCTATT TACCGCGTAC CAGCGAATCA GAGACATTGA AAAAGATTCG CCACACCGCT 
TCCCACGTAA TGGCAATGGC AGTACAGAAA CTGTTCCCTA AAGCGCAAGT GACAATTGGC 
CCCTGGATTG AGAATGGGTT TTATTACGAC TTTGATAGTC CAGAGCCATT TACTGATAAG 
GATCTCAAAG CCATTCAAAA AGAAATGGTG AAGATCATTA ACCGTAAGTT GCCAGTGGTG 
CGGGAAGAAG TGAGCCGGGA AGAAGCGGAA CGGCGCATTC AAGAAATCAA GGAACCTTAT 
AAATTAGAAA TCCTGGCAGA TATTAAATCA GAACCGATCA CAATTTATCA CCTGGGAAAT 
GAGTGGTGGG ATTTGTGCGC CGGGCCTCAT GTGGAAAATA CCAAAGATTT AAATCCCAAA 
GCAATTGAAT TAGAAAGCGT GGCGGGTGCT TATTGGCGGG GAGATGAAAC CAAAGCCCAA 
TTGCAACGGA TTTATGCTAC AGCTTGGGAA AGTCCAGAAC AACTGGCAGA GTATAAGCGC 
CGCAAAGAAG AAGCCCTACG CCGTGACCAC CGTAAACTAG GTAAAGAACT AGGATTATTT 
ATCTTTTCTG AGCAAGTGGG GCCTGGTTTA CCCTTGTGGA CACCCAAAGG TACCTTGCTA 
CGCAGCACCT TAGAACAATT CCTGCAACAG GAACAGCTCA AGCGTGGTTA TTTACCTGTA 
GTTACCCCCC ATATTGCCAG AGTAGATTTA TTTAAGACTT CTGGACACTG GCAAAAATAT 
AAGGAAGATA TGTTTCCTTT AATGGCGGAA GATGAAGCAG CCGCAGCAAT TGAGCAAGGC 
TTCGTCCTCA AGCCAATGAA TTGCCCCTTC CACATCCAAA TATATAAGAG TGAATTGCGT 
TCTTATCGGG AACTACCAAT GCGCTTGGCT GAGTTTGGGA CTGTTTATCG CTACGAACAG 
TCAGGGGAAT TAGGCGGTTT AACCAGAGTA CGCGGTTTTA CTGTTGATGA TTCTCACTTA 
TTCGTGACCC CAGAACAGTT AGACAGCGAA TTCCTGAATG TTGTGGATTT GATTTTGTCA 
GTGTTCAAGA GTCTGCAATT GAAAAACTTT AAAGCTAGAC TCAGTTTCCG TGATCCAGCC 
AGCGATAAGT ACATCGGTTC TGATGAAGTT TGGAACAAAG CCGAGGGTGC AATCCGTCGT 
GCGGTGGAAC AGTTGGGGAT GGAACACTTT GAAGGAATTG GGGAAGCGGC CTTTTACGGG 
CCGAAATTAG ACTTTATTTT CAGCGATGCT TTAGAAAGAG AGTGGCAACT AGGAACTGTA 
CAGGTAGATT ACAACTTACC AGAACGCTTT GATTTAGAAT ACGTCGCGGA AGATGGGACT 
CGCAAACGTC CTGTGATGAT TCACCGTGCG CCTTTCGGCT CCCTAGAACG GCTGATTGGG 
ATTTTAATTG AAGAGTATGC AGGGGATTTC CCCCTATGGT TAGCACCGGT GCAAGCCAGA 
TTGTTACCTG TAGGTGAAGC CCAGTTAGAC TTTACCAAAG ATGTAGTAGC AAAATTGCGA 
TCGCTAGGGA TTCGTGCCGA AGTTGATACC AGTGGCGATC GCCTGGGTAA ACTCATCCGC 
AACGCAGAGA AAGATAAAAT ACCCGTAATG GGGGTAGTGG GAGCCAAGGA AGTAGAAACC 
AACTCCTTAA GTATCCGTAC CCGTGCTTCC GGAGAGTTAG GAGCTATACC TGTGGATGAA 
GTGGTGCAGA AGATGAAGGA TGCGATCGCT AACTACGAAA ACTTTTAG 

 

Protein sequence

MVQQPMSPNQ DPNNQPEQPE KIYLPRTSES ETLKKIRHTA SHVMAMAVQK LFPKAQVTIG 
PWIENGFYYD FDSPEPFTDK DLKAIQKEMV KIINRKLPVV REEVSREEAE RRIQEIKEPY 
KLEILADIKS EPITIYHLGN EWWDLCAGPH VENTKDLNPK AIELESVAGA YWRGDETKAQ 
LQRIYATAWE SPEQLAEYKR RKEEALRRDH RKLGKELGLF IFSEQVGPGL PLWTPKGTLL 
RSTLEQFLQQ EQLKRGYLPV VTPHIARVDL FKTSGHWQKY KEDMFPLMAE DEAAAAIEQG 
FVLKPMNCPF HIQIYKSELR SYRELPMRLA EFGTVYRYEQ SGELGGLTRV RGFTVDDSHL 
FVTPEQLDSE FLNVVDLILS VFKSLQLKNF KARLSFRDPA SDKYIGSDEV WNKAEGAIRR 
AVEQLGMEHF EGIGEAAFYG PKLDFIFSDA LEREWQLGTV QVDYNLPERF DLEYVAEDGT 
RKRPVMIHRA PFGSLERLIG ILIEEYAGDF PLWLAPVQAR LLPVGEAQLD FTKDVVAKLR 
SLGIRAEVDT SGDRLGKLIR NAEKDKIPVM GVVGAKEVET NSLSIRTRAS GELGAIPVDE 
VVQKMKDAIA NYENF