Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2778 |
Symbol | |
ID | 3681711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3432126 |
End bp | 3433355 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637718124 |
Product | Integrins alpha chain |
Protein accession | YP_323286 |
Protein GI | 75908990 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAA CGCAAAGCTT TTCCAAGAGA ATAGATAATT CGCTTAATAC ATCTTTTGCA AGATCAGCAT CTTTGGTATC GAGTGCTTAT GTAAGTGATT TAAATACTGA GCTACCATCA TCTAGTAATA GCTCTGCAAC AACACAAGTA GATTTGCCAA TTTCCATTCC TGGTTTGAGT GCCAACCCAA ATCCTAATCC TTACTTAACT AGCGCAGCAA TTTCACCTGA TTTCAACGGC GATGGTAAGG CAGATAAGGT TTGGGTTAAT ACTCAAACAG GTGAAATTAG AGTGAGGTTG ATGAACGGAA CAGTCACTCA AGAAGAAGCC TCTTTAGGAA CATTTGATCT GAGTGTCTGG ACTTATAAAA TCGCTGACTT TAACAGTGAT GGCAAGACTG ACTTCCTGTT ACGGAACAAT GCAACAGGCG AGAATGCGAT TGCGATCATG GATGGAGCTA GAGTTGCTAA CTTTGTTTAT CTAGACAAAG TTGATCCAGG TTGGAATGCT AGCATCGGTG ATTTTAACGG CGATCGCAAA ACCGACATCC ACTGGAATAA TACTCAAACA GGTGAAAATG CAATTTGGCT GATGGATGGC ACAACCGTTG TCAGTGCCAA TGTTCTGGAT ACCACAACCC CAGGGTTGAG TGCCACTATT GTTGACTTCG ACGGAAACGG TAAGAGTGAT ATCTTCTGGC GAGATACAAC CACAGGTGCA AACTCCGTTT GGTTTATGGA TGGTATCCAA GCTACCAAGT ATGATCTACA AGCACAAGAC GCATCTTGGT CTTACAGCCT TGGCGATTTC AACGGTGACT TCACTACTGA TCTTCTCTGG CGTAATACCG TCACTGGTGA AAACAAAATT TGGACAATGA ATGGCATTTT TGTCACTGAA GGTACTTTAA ACACCCTCAG TTCCGATTGG ACAGCCAACA TTGGTGATTT CAATGGTGAT GGCCGCACCG ATATCTTCTG GAACAACACT ACAACTGGTG CAAACACTGC TTGGTTAATG AATGGTACAT CCGTTACCAG TGAAGCCTTT CTACCAAGTA GAAGTCCAGG TTCTAAGGCG TATATTGGCG ATTATAACAG CGATGGCAAA TCTGATATTT ACTGGCGTGA TCAGGCAACC GGTACAGATG CCATCTGGAC TATGGATGGT ACCTTGGCTA CTGAAACTCC TGTTACAGAT GCTCTGACTC CAGAGTGGTA CACAGCTTAG
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Protein sequence | MQETQSFSKR IDNSLNTSFA RSASLVSSAY VSDLNTELPS SSNSSATTQV DLPISIPGLS ANPNPNPYLT SAAISPDFNG DGKADKVWVN TQTGEIRVRL MNGTVTQEEA SLGTFDLSVW TYKIADFNSD GKTDFLLRNN ATGENAIAIM DGARVANFVY LDKVDPGWNA SIGDFNGDRK TDIHWNNTQT GENAIWLMDG TTVVSANVLD TTTPGLSATI VDFDGNGKSD IFWRDTTTGA NSVWFMDGIQ ATKYDLQAQD ASWSYSLGDF NGDFTTDLLW RNTVTGENKI WTMNGIFVTE GTLNTLSSDW TANIGDFNGD GRTDIFWNNT TTGANTAWLM NGTSVTSEAF LPSRSPGSKA YIGDYNSDGK SDIYWRDQAT GTDAIWTMDG TLATETPVTD ALTPEWYTA
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