Gene Ava_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2770 
Symbol 
ID3681898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3419942 
End bp3421354 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content47% 
IMG OID637718116 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_323278 
Protein GI75908982 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAG CATCTCATCC CACAGTCATC CTGGGTGCTG GCTTTGCTGG ACTGTTTACG 
GCTCTGCACT TAAGCCAGCA AAATTACTCT TATCCGATTA TTTTAATAGA ACAGCGCGAT
CGCTTTAGTT TCAAACCGTT ATTGTATGAA TTACTAAGCG GTGAGCTGCA TAGCAAACAG
GTCTATCCTC GTTATCAAGA GCTGTTAGCT GGTAGCAAAG TTAAGTTTGT CCAAGACACG
GTGCAATCGA TTGATATACA TCAGCAGAGA GTTGATACAG TCTCTGGTCA AGCTTTCCAC
TACAGCAACT TGGTTTTAGC ACTCGGTAGC AAAACAACTT ATTTTGCTAC TCCCGGTGCG
GCAGAATATG CAATGCCCTT TACCTCTGGG GAACAGGCGA TCGCACTCCG CCAACACTTG
CGTCGCAAAT TATATCAAGC CATTCAAACA CCAGACTCAG AACATCGTCG TTTACTGTTA
ACTGTTGCCA TCATTGGTGC TGGACCAGCT GGTATTGAAT TGGCCTGTAC CTTAGCCGAT
TTACTGCCCA TTTGGTACGA CGAGTTGGGC GGCGATGGTA GTGAAATTCA TGTTGTCCTG
GTCAACCGCA GTCGGGAAAT TCTCAAAGGC GATGTTAATA GCCATTTACG CTGCACAGTT
GAACGCGCCA TGAAAAATCG CCTCATTCCC GTGGATTTTT TATTTGATGC GGCTGTCACA
AAGATTACAT CTGAAGGTGT AGAGTATCGG CGACAGGAGC AAATACAGAT GTTACCAGCA
GGAACCATCG CTTGGACTGC TGGTACTGCA CCCAATCCTT TGCTGATGGA ATTACCCGTT
TCTCAAAATC GAGGGCGGTT ACTGGTAAAA CCCACATTGC AACTGTCTAA TTTTCCCGAA
ATCTTCGCGG CGGGTGATTG TGCTATGGAT AGCGATCATC CCCAGCCACC CACAGCTCAA
GTAGCTTATC AACAAGGAAT TGCGATCGCT CAAAATCTCC AACGAATCAG CCAAAACAAA
CCAACCGTTC CCGTACAAGT CCAACTGCGT GGCACTTTGA TGAAATTAGG ACTCAACGAA
GGCGTTGCTA ACTTATTCAA CAAAGTGCAA ATCAAAGGAC AAGCAGGCCA TTTGATTCGC
GAAGGAACAT ATTTACAACT ACTACCCAAC TCTACTCATA ACCTGAAAGT TACAACCGAG
TGGCTAACAG ATGAATTATT TCAGCGTCAC CGTGCTGCTA CCCCCATGCA GCTGGGACAA
ACACCGTGGT TATCTGGAGT CGCCACCACC GCAGCAGCAC TAATTTTTGC CACCCCCCTA
GTTTGGCGAG TAGCCCAACC TACCCAATTT CAGCAAAACC TCAGTTGGAC AGGCGTTCCC
ACTTTACTCA ATCACCTCAC ACCCCGCCGC TAA
 
Protein sequence
MQQASHPTVI LGAGFAGLFT ALHLSQQNYS YPIILIEQRD RFSFKPLLYE LLSGELHSKQ 
VYPRYQELLA GSKVKFVQDT VQSIDIHQQR VDTVSGQAFH YSNLVLALGS KTTYFATPGA
AEYAMPFTSG EQAIALRQHL RRKLYQAIQT PDSEHRRLLL TVAIIGAGPA GIELACTLAD
LLPIWYDELG GDGSEIHVVL VNRSREILKG DVNSHLRCTV ERAMKNRLIP VDFLFDAAVT
KITSEGVEYR RQEQIQMLPA GTIAWTAGTA PNPLLMELPV SQNRGRLLVK PTLQLSNFPE
IFAAGDCAMD SDHPQPPTAQ VAYQQGIAIA QNLQRISQNK PTVPVQVQLR GTLMKLGLNE
GVANLFNKVQ IKGQAGHLIR EGTYLQLLPN STHNLKVTTE WLTDELFQRH RAATPMQLGQ
TPWLSGVATT AAALIFATPL VWRVAQPTQF QQNLSWTGVP TLLNHLTPRR