| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2710 |
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| Symbol | |
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| ID | 3682208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 3346090 |
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| End bp | 3347847 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637718055 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_323218 |
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| Protein GI | 75908922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.132036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.320847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCA TCAGCGAAGA TATTACTGAC GGCAATCAAG CTGAAGCGGC ACTGCGTGAA
AGTGAAGCTA AATTTCGTTC GCTGATTCAA AATAGCTCCG ACATCATTGG TATTTTTGAA
CCAGATGGAA CTATTCGCTA CGAAAGTCCA TCTGTTGAAA GAATTCTAGG ATATAAACCA
GAAGAACTAG TCGGTAAAAA CGCTTTTGAT TTTATTCATC CCGATGATAT TGCTGGTAGT
TCTGAAAGCT TTAATTACTT AATCCAAAAT TTAGGCGCGA CTGTACTAGT AGAGTCGCGT
TTTCGACGCA AAGATGGTTC GTGGTGTTTT CTCGAATCAA CAGGTAGTAA TCTTCTAGCA
GAGCCATCTG TGAAGGGCAT AGTTATTAAT TCTCGTGATA TTACCGATCG CAAGCTAGCA
GAAGAGCGAT TAGTTCATGA TGCCCTACAT GATGTATTAA CAGGGTTGCC AAATAGAGTC
TTATTCATAG ACCGCTTAAG ACGTGCGGTT GAGTATGCAA AACGATATTC GGATCATCTG
TTTGCGGTGC TGTTCCTCGA TTTGGATCGC TTCAAGTTTA TCAACGACAG CCTGGGACAC
ACAATTGGCG ACCAATTACT GGTGATTATT GCTCAAAGGC TGATAGAGTG TCTGCGACCT
ACAGATATAG CTGCACGCTT TGGCGGAGAT GAGTTCATCA TTCTGCTAGA AGGTATTCAA
GACATTAGTG ACACAGTGCG TGTCGTTGAG CGAATACAGG AGAAATTGTT AGTTCCGGTG
GATTTAAGTG GCCATGAAAT TTTTACCACA GCTAGTATCG GTATTAGTTT GAGCGCCACA
GGTTATGAGC AACCAGAAGA CCTTTTACGT AACGCCGACA TTGCGATGTA CCGAGCTAAG
GCGCGGGGTA AGGCGTGTTA CGAAATATTT AATAGTGATA TGCACGTTCA GATAGTGGAA
CGTTTGCAGC TAGAAAACGA CTTACGCAAA GCAATTGAAC GTCATGAGTT CCTAGTTTAT
TATCAGCCTA TTGTGTCACT GGCAAGCGGG AGAATTATTG GTTTTGAAGC GCTTGTACGT
TGGCTACATC CAGAGCAGGG AATTGTGTTC CCGGAGGAGT TTATGCCAAT CGCCCAAGAA
ACCGGACTAA TTATCCCGAT TGATGCCTGG GTGTTGCGTG AGGCGTGTCG CCAGACAAGG
CAGTGGCAGG AACAGATTCC CTCTCAATCA GTAAATTTAC ATCAGCAGCC TTTGAGCATC
AGTATTAATC TTTGTAGTTC CCGATTCAGC CAAAAAAAGC TGCTGGAGGA TATTAATCAA
GTACTACAAG ACACTGGTTT AGATGCACAG AGTTTGAAAT TGGAAATTAC AGAAAGCGTA
ATTATGGAAA ATGGGGAAAA TGCTACTACT ATGCTCTATC AATTGAGAAA CTTAGGCATC
GAATTAGCAA TTGATGATTT CGGTACAGGA TATTCTTCAT TAGGTCGTCT CCATAATTTT
CCGATTAATG GGCTAAAGAT TGATCAATCC TTTGTTAGTG GGAGAGGTGT AGAAGCAGGC
AATTTACACA TTGTGGAGAC TATAGTTACC CTTTCTAGCA AACTGGGTGT GGATGTAACA
GCCGAGGGGG TGGAAACACC AGCGCAACTA CAAAGGCTTA GAGAGTTGAA ATGTGAATAT
GGTCAGGGAT ACTTTTTCTC GGAACCATTG GATAGCGATT CGGCAAAGGC GTTAATTATG
AGCAATCCCC AATGGTAG
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| Protein sequence | MTSISEDITD GNQAEAALRE SEAKFRSLIQ NSSDIIGIFE PDGTIRYESP SVERILGYKP
EELVGKNAFD FIHPDDIAGS SESFNYLIQN LGATVLVESR FRRKDGSWCF LESTGSNLLA
EPSVKGIVIN SRDITDRKLA EERLVHDALH DVLTGLPNRV LFIDRLRRAV EYAKRYSDHL
FAVLFLDLDR FKFINDSLGH TIGDQLLVII AQRLIECLRP TDIAARFGGD EFIILLEGIQ
DISDTVRVVE RIQEKLLVPV DLSGHEIFTT ASIGISLSAT GYEQPEDLLR NADIAMYRAK
ARGKACYEIF NSDMHVQIVE RLQLENDLRK AIERHEFLVY YQPIVSLASG RIIGFEALVR
WLHPEQGIVF PEEFMPIAQE TGLIIPIDAW VLREACRQTR QWQEQIPSQS VNLHQQPLSI
SINLCSSRFS QKKLLEDINQ VLQDTGLDAQ SLKLEITESV IMENGENATT MLYQLRNLGI
ELAIDDFGTG YSSLGRLHNF PINGLKIDQS FVSGRGVEAG NLHIVETIVT LSSKLGVDVT
AEGVETPAQL QRLRELKCEY GQGYFFSEPL DSDSAKALIM SNPQW
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