Gene Ava_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2597 
Symbol 
ID3680923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3219206 
End bp3219919 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content43% 
IMG OID637717944 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_323107 
Protein GI75908811 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCAGC ATACTTGGCT ACCAAAACCC CCAAATTTAA CCTTATTATC AGATGAAGTT 
CATCTCTGGC GCATTCCCCT TGACCGACCA GAATCACAAC TACAGCATTT AGCAGCCACT
TTATCTAGTG ACGAATTAGC CCGTGCAAAC AGATTTTATT TTCCCGAACA TCGCCAGCGT
TTTACTGCTG GTCGTGGTAT TCTCCGCAGT ATTTTGGGAC TTTATTTGGG GGTGGAACCA
AAGCAAGTTA AATTTGAATA TGAATCCCGT GGTAAACCAG TATTAGGCGA TCGCTTTGCC
GACAGTGGTT TATTATTTAA CTTGTCACAC TCCCAGAATT TGGGTTTGTG TGCAGTCAAT
TACACGCGTC AAATCGGCAT CGATTTAGAA TATCTCCGCC CCACATCTGA TTTAGAATCC
CTTGCCAAAA GGTTCTTTTT ACCGCGAGAA TATGAATTAT TGCGATCGCT ACCCGATGAG
CAAAAACAAA AAATTTTCTT TCGTTACTGG ACTTGTAAAG AGGCTTATCT TAAAGCAACG
GGTGACGGCA TCGCTAAATT AGAAGAAATT GAAATAGCAC TAACTCCCAC AGAACCAGCT
AAGTTACAGA CAACTCCAGC GTGGAGTCTC CTAGAGCTAG TGCCAGATGA TAATTGTGTT
GCTGCTGTTG CCGTGGCGGG TTTTGGCTGG CAGCCAAAAT TCTGGCAGTA TTGA
 
Protein sequence
MLQHTWLPKP PNLTLLSDEV HLWRIPLDRP ESQLQHLAAT LSSDELARAN RFYFPEHRQR 
FTAGRGILRS ILGLYLGVEP KQVKFEYESR GKPVLGDRFA DSGLLFNLSH SQNLGLCAVN
YTRQIGIDLE YLRPTSDLES LAKRFFLPRE YELLRSLPDE QKQKIFFRYW TCKEAYLKAT
GDGIAKLEEI EIALTPTEPA KLQTTPAWSL LELVPDDNCV AAVAVAGFGW QPKFWQY