Gene Ava_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2584 
Symbol 
ID3680910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3193373 
End bp3193840 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content39% 
IMG OID637717931 
Producthypothetical protein 
Protein accessionYP_323094 
Protein GI75908798 
COG category[S] Function unknown 
COG ID[COG4704] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.5639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTA TTTCACGTTT GCGCTACTTT TTATTAGCTG CTTTATTAAG TATCGTTTCC 
TTAAAAACAG CGAACGCAGA AACTACAACT AAATTAACTG TTGTAGTCAA CGGGATACGC
CAACAAAAAG GCGCAATATG CTTCCGGGTG TACGCCAGTG AAAAAGGATT TCCCATGAGT
GATACTAGCG AAATCCAAAG TGGCTGTACA AGAGTTACAG GTAAGACTGT AACCAAAAGT
TTCTACGGCT TGAAACCAGG CAAATATGCT GTGGCGATCG TCCATGATGA AAATGGCAAT
CGCAAGTTAG ATACAGACTT TTTTGGTATT CCCAAAGAAG GTTTTGGAAT TTCTAATAAT
CCCATCGTTT CTATCCAAAC AGGAACACCA GCATTTAGCA AGTCAAGTTT TACAGTCACA
AAAAGCACCA GCGTTAATAT TTCCGTTAAA TACTCACTTG ATCCATAA
 
Protein sequence
MLSISRLRYF LLAALLSIVS LKTANAETTT KLTVVVNGIR QQKGAICFRV YASEKGFPMS 
DTSEIQSGCT RVTGKTVTKS FYGLKPGKYA VAIVHDENGN RKLDTDFFGI PKEGFGISNN
PIVSIQTGTP AFSKSSFTVT KSTSVNISVK YSLDP