Gene Ava_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2582 
Symbol 
ID3680908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3190694 
End bp3191923 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content41% 
IMG OID637717929 
Producthypothetical protein 
Protein accessionYP_323092 
Protein GI75908796 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0706725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAT TGGCGATATC AATATCTAAG TTATTGGTGA TTTGGTTAGT TGTTCAGGTG 
GGCTTGGTAC TCAAATTTTT GTGGTCTTTG AACTTACGAT CCCATAGCTT ACCTGATGAG
AAGTTGCCAA AAACGGCAGT ATTGTTATAT TTGCGGGGGG CAGATCCGTT ATTACCTGAT
TGTTTGCGAT CGCTCCTCCA GCAAAACTAT CCACGCTATG ATTTAAAGCT GATCGTCGAT
AGTGAACAAG ACCCAGCTTG GCAAGTTGTC AACGAGACTA TTAAAGAAAT CGGGGCAAAT
AATTTTCAAA TTAATTATTT GCGGACTATC AACCAAACTT GTAGTCTCAA ATGCAGTTCC
TTAGTGCAAG CTGTTTCAGA ATTAGATGAT TCTTATCAGG TAGTGGCTTT AGTAGATGCT
GAGACTATCG TTCATGCCAA TTGGTTACGA GAATTAGTTA GCCCTCTGAC AAATCCGACG
GTAGGAGTAA CTACAGGTAA TCATTGGTAT GTACCTACAG GAACCTATTG GGGGACTGTG
GTTCGGTACA TTGGCAATAT CTCGGCGATC GTCCAGATGT ATCTATACGG CATTCCTTGG
GGTGGAAGTT TAGCAATAAA AACGGAAGTA CTGCACCGAA CAGGGTTGTT AGAGAGGTGG
GAACATACCC TGAGTGAGGA TACGATGCTA TCTAGCGTCA TGGCTAAATA TAATCTTCAG
GTCAAGTTTG TACCTTCTCT GATTATGGTC AATCCACAAG AGTGTGATTT ACCAAATTTA
AAATACTCGT TCCAGCGCCA ACTACTTTCG TTCCGACTTT ATCATCCTTG GTGGTGGGTG
TTAGTAGGTG AAGCGGTTTT AACAATAGGT CTACCTCAAC TTCTATTGTT TGTGTGGTTT
ATCTCATTTT TTAGTGGGCA AGGAGATACA GCCATTTTTG CTTTGAGCTG GTATGTCATT
TATATATTGG CATTAACTAT GCTCATCCTG TTTTTAGAGT TGGGTGTACA ACCAATCATA
CGTTCACAAG GTAAACCTGT AACTCAACTG TCAGCATCGC TCATCTTGAG AATAGCGATG
GGAATACCAC TTACACACTG GGTTTATGGC TGGGCAATGA TAGCCTCTCT ACGGATGCAA
ACAGTTAATT GGTGTGGTGT CACCTATGAA GTTAACGGGC CTGTGAATAT TCGCCTAGCT
GATTATCGTC CTTATCAACC ATTGAATTAA
 
Protein sequence
MDELAISISK LLVIWLVVQV GLVLKFLWSL NLRSHSLPDE KLPKTAVLLY LRGADPLLPD 
CLRSLLQQNY PRYDLKLIVD SEQDPAWQVV NETIKEIGAN NFQINYLRTI NQTCSLKCSS
LVQAVSELDD SYQVVALVDA ETIVHANWLR ELVSPLTNPT VGVTTGNHWY VPTGTYWGTV
VRYIGNISAI VQMYLYGIPW GGSLAIKTEV LHRTGLLERW EHTLSEDTML SSVMAKYNLQ
VKFVPSLIMV NPQECDLPNL KYSFQRQLLS FRLYHPWWWV LVGEAVLTIG LPQLLLFVWF
ISFFSGQGDT AIFALSWYVI YILALTMLIL FLELGVQPII RSQGKPVTQL SASLILRIAM
GIPLTHWVYG WAMIASLRMQ TVNWCGVTYE VNGPVNIRLA DYRPYQPLN