| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2447 |
|---|
| Symbol | |
|---|
| ID | 3683090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 3038333 |
|---|
| End bp | 3038914 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637717790 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322957 |
|---|
| Protein GI | 75908661 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3247] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.632564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATA AATCCCTGGG TGTGGGAAAA CGACTAACTC GCAATTGGTG GACAGTGGTG
GCGCGGGGAG CGGTCGCCAT TATTTTTGGT TTAGTGGCTT TATGCTGGCC GATTCTGACC
TTAAAGTCAT TGGTGTACCT GTTTGGGAGT TTTTGGCTGC TGGGGGGAAT ATTATTGGCG
ATCGCAGCAT TTCAAGATCG GTTACAGGAC AATCATAGTA AATTATTGTT ACTAGAAGGA
ATCATAGGTA TTGGAGTAGG AGCGATCGCT TTTATTTACC CTGGGATCAC TGCATTTGTA
TTACTTTACT TAATTGCTGC TTGGGCAATT TGTACAGGCA TATTCGAGAT TCTTACATCT
GTGCAACTAC GACAAGCAAT AGACAATCAG TGGCTTCCCG CAGTAGCCGG AATTCTTTCT
CTCATCTTCG GTATCATATT GATTACCTGG CCAGTAGCGG AGGCTTTGGC TATTCTGTGG
TTAATTGCTG CCTATACCAT CCTGTTTGGC ACACTGCTCT TAATTATGGG TTTCCGATTA
CGTAGTTGGG GGTTGAAAAA TTCACAACTA ATCACAAACT AA
|
|---|
| Protein sequence | MRNKSLGVGK RLTRNWWTVV ARGAVAIIFG LVALCWPILT LKSLVYLFGS FWLLGGILLA
IAAFQDRLQD NHSKLLLLEG IIGIGVGAIA FIYPGITAFV LLYLIAAWAI CTGIFEILTS
VQLRQAIDNQ WLPAVAGILS LIFGIILITW PVAEALAILW LIAAYTILFG TLLLIMGFRL
RSWGLKNSQL ITN
|
|---|
| |