Gene Ava_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2433 
Symbol 
ID3683076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3022695 
End bp3023948 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content43% 
IMG OID637717778 
Productglycosyl transferase, group 1 
Protein accessionYP_322945 
Protein GI75908649 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.287149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACGT CCGTCGCTTA TATTCTCAAA CGTTATCCCC GCTATTCTGA AACTTTTGTC 
GTTAATGAAA TTTTGGCTCA TGAAGCGGTT GGCTTAGATA TAAAAATTTT CGCTTTAAGA
CCACCATCAG ACACACACTT TCAAAATATT ATTTCTCAAG TGCGTGCGCC TGTAACTTAT
ATTCGTAAGC CAATTCAAGG TAGGGTGAGT GATTCACTTA ATAGTCTTGC GCCTACAGCC
GCTAGCTATT TTTGGGCAGA ATTACAAGAA GCAAGTAAGG TTATCCCTGA TTTTTGGTCA
AAATTGGCCT TTGCTCAAGG GGAAAAAGCC AGCACTGTCT ACCAAGCTGC ATGGTTAGCA
CGAGAAGTCA AGCTCAAAGG TATCACTCAT TTACACGCTC ATTTCGGCAC TGTAGCAACT
AGTGTCGCTC GTCTAGCATC TCACTTTACG GGCGTTCCCT ATACTTTCAC AGCTCACGCT
AAAGATATCT TTCATGAAAG CGTAGAATTT GCGGATATGG AACAAAAGCT AAAAGATGCG
GCCGGTGTGG TGACTGTCAG TGACTATAAT GTCAAATATC TGCAACAAAC ATATAACCTA
GCTGCAAACC AAGTCCAACG CATCTATAAC GGGTTAGATT TACAAAAATT ACAATATTCT
TCTCCGGCGG AACGTCCACC ATTAATTATC TCAGTGGGTC GCTTAATTGA GAAAAAAGGG
CTATCTGTTC TCATGGATGC TTGTGCAATT CTCCAGCAGA GAAATTATGA ATTTCAGTGT
CAAATTGTGG GTACTGGTTC TTTAGAATCA ACTCTGCATC AGCAGATTCA GGATTTAGGA
TTGCAATCTT GTGTGCAAAT TATCGGCCCT CGTCCTCAAA ATGAGGTGTT TCAATTAGTA
CAGCAGGCTG CTGTGTTTGC TGCGCCTTAT GTGATTGGCA AAGATGGTAA TCGAGATGGA
TTACCTACGG TTTTACTGGA AGCTATGGCT CTGGGAACTC CCTGTGTCAG TACGGTTGTG
ACGGGTATTC CTGAAATAGT GCGTGATGGG GAGACTGGGT TGATTGTCCC GCAATATGAT
GCGGAGGAAT TAGCCACTGC GCTTGGTCAA CTTTTGAAGG ATGCGGCTTT GCGGGTGAGG
TTGTCTACTC AGGCTAGGAG TTTGATTGAG TCGGAGTTTA ATATTTGTCG GAATACGGAA
GTTTTGAGGG AGTTATTTCT CACGCAAAGG CGCAAAGGCG CAAAGGAGGA GTGA
 
Protein sequence
MSTSVAYILK RYPRYSETFV VNEILAHEAV GLDIKIFALR PPSDTHFQNI ISQVRAPVTY 
IRKPIQGRVS DSLNSLAPTA ASYFWAELQE ASKVIPDFWS KLAFAQGEKA STVYQAAWLA
REVKLKGITH LHAHFGTVAT SVARLASHFT GVPYTFTAHA KDIFHESVEF ADMEQKLKDA
AGVVTVSDYN VKYLQQTYNL AANQVQRIYN GLDLQKLQYS SPAERPPLII SVGRLIEKKG
LSVLMDACAI LQQRNYEFQC QIVGTGSLES TLHQQIQDLG LQSCVQIIGP RPQNEVFQLV
QQAAVFAAPY VIGKDGNRDG LPTVLLEAMA LGTPCVSTVV TGIPEIVRDG ETGLIVPQYD
AEELATALGQ LLKDAALRVR LSTQARSLIE SEFNICRNTE VLRELFLTQR RKGAKEE