Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2421 |
Symbol | |
ID | 3683103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 3009069 |
End bp | 3011123 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717766 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_322933 |
Protein GI | 75908637 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000243595 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAATTT TACTAGTAGA AGATGACGAA CTGATTGGCG AATTACTTGT TAAGTCGCTA ACAAGTCAGC ACTATACTGT TGATTTCGCC AAAGATGGAG AAGAAGGCTG GAATTTTGCG GAGTTATATA CTTATGACTT GATTCTGTTA GATTTAATCT TGCCTAAGCT CGATGGCATT AGTTTCTGTC GGCAGTTACG GGCTAGTGGT AATCAAACAC CGGTTCTTTT GTTAACTTCT CAAGATACAA GCATTACAAA GGTTGCTGGC TTGGATGCTG GAGCAGATGA CTATGTGGCA AAACCTTTTG ATTTTCAAGA GTTATTAGCT AGAATTCGGG CTTTATTACG TCGGGGTGGT TCAGCTTTAC CGCCTCTGCT GGAGTGGAAT AACCTCCGGC TTGATCCGAG TACTTGTGAA GTTGCCTGTG ATGGAAAACT CTTACATTTA ACTCCCAAAG AATACGGTTT GTTAGAACTG TTTCTCCGCA ACAGTCACCG CATTTTTAGT TGTAGCGCTT TAATAGACCA ATTGTGGTCA TTTGAAGAAC CACCCACAGA AGATACAGTC AGATCCCATA TCAAAGGATT GAGGCAAAAG CTGAAAGCAG CCGGAGTAGT TGAAGATCCT ATTGATACGG TTTATGGGAT TGGGTATCGG CTCAAACCTG TGCAGTCAGG AAGAGAAGAA GAATTAAATC TTGAAAAAGT TGCCGATGCG ATCGCCAATC CGGTCGAGAA TGAGGTAAGA CAAGTATGGA AAGATGTAGT AGAGAAAATA GAAGCGCGAG TAGCTGTAAT TGAACAAGCT TCTCATAAAC TGCTACAAAA CAAAGTCAGT GAGGAAATAC TGTCAAAGGC CAAGGTGGAA GCTCACAAAT TAGCTGGTTC TTTGGGGATG TTCGGCTCTG ATGAAGGTTC CCAGATAGCT CAAGAAATAG AATCTTTATT AGATAATGGT AAAAAGCTAA AAGCGTCTGG TAGGAAGCAT TTGGGGCAAG TGGTTGAGGC ATTGCACCAA GAATTAGAAA ATTTAAAATC TGGGTATAAA ACAGAACCAT CAGTAGTGGA TGCAAAAGCG GATGATCGCC CCCTGGTGCT AGTGATTGAC AAAGACCAGG AATTAGTCAG GGAGAGCAGG AGTCAGAGTT CAGAGGCGAT CGCCCCTGGG CAACTAACAC AAGCCAGAGT GATGATTGTA GACGATGATC CGCAAATATT AACCGCACTC CAAACTTTAC TCAGTGCTTG GGGGATTAAA GTCTATACCC TCGCCCATTC CCAGGGATTT TTGGAAGCGA TGGCACTGGC TGAACCAGAA CTGCTGATTT TAAAGATGGA AATGCCTAGT ACTAGTGGTA TAGAATTATG CCAAATTGCC AGACAAGAAC CCCAATGGGC TGGTTTACCA ATTCTTTTTC TTACCAATCG TCACGATACC CTAACTAGAC AGCAAATTTT TATCGCAGGT GCTGACGATT ATATTAGTAA ACCCATTGTC GAACCCGAAC TCATAGGGCG GATACTCAAC CGTCTAGAAC ACAATCGCTG GTTACAGAAT TTAGCAGAAA TAGATACGCT GACATTGGTA GCTAATCGCC GTAAATCCAC CCAGGAATTA AACCATTATC TTCAGTGGTG TCATACTCAC CAGCAGACCA TGAGTTTCGC TGTTGTAGAA CTGGATGGAC TGAAGCAGAT TAATTATAAC TATGGTCATG AAGTAGGCGA TCGCATCTTA TCTCAACTGG GCGAATTATT AAGGCAAATG TTCCATAGTC AAGATGTAGT CGGGCGCTGG GGAGGGACGG AGTTTATCTT AGGAATGGCA GGAATAACCA AAGGTGAAGG GGTAAGGCGG TTAGGGGAGT TACTGAAAAC TTTCCGCCAA ATTGAATTTA TTACTACTAG CAATCAATCA TTTCACGCCA CCTTTAGCGC CGCAGTGGTG GAATATCCCC AAGATGGCGA CACACTTGAA GCCCTATATC AAGCAGCTGA CATAGTTCTT AACCAAGCTA AGACGAGTGG AAGAGATCGA GTGTTGAGTA GTTGA
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Protein sequence | MRILLVEDDE LIGELLVKSL TSQHYTVDFA KDGEEGWNFA ELYTYDLILL DLILPKLDGI SFCRQLRASG NQTPVLLLTS QDTSITKVAG LDAGADDYVA KPFDFQELLA RIRALLRRGG SALPPLLEWN NLRLDPSTCE VACDGKLLHL TPKEYGLLEL FLRNSHRIFS CSALIDQLWS FEEPPTEDTV RSHIKGLRQK LKAAGVVEDP IDTVYGIGYR LKPVQSGREE ELNLEKVADA IANPVENEVR QVWKDVVEKI EARVAVIEQA SHKLLQNKVS EEILSKAKVE AHKLAGSLGM FGSDEGSQIA QEIESLLDNG KKLKASGRKH LGQVVEALHQ ELENLKSGYK TEPSVVDAKA DDRPLVLVID KDQELVRESR SQSSEAIAPG QLTQARVMIV DDDPQILTAL QTLLSAWGIK VYTLAHSQGF LEAMALAEPE LLILKMEMPS TSGIELCQIA RQEPQWAGLP ILFLTNRHDT LTRQQIFIAG ADDYISKPIV EPELIGRILN RLEHNRWLQN LAEIDTLTLV ANRRKSTQEL NHYLQWCHTH QQTMSFAVVE LDGLKQINYN YGHEVGDRIL SQLGELLRQM FHSQDVVGRW GGTEFILGMA GITKGEGVRR LGELLKTFRQ IEFITTSNQS FHATFSAAVV EYPQDGDTLE ALYQAADIVL NQAKTSGRDR VLSS
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