Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2404 |
Symbol | |
ID | 3683203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 2988714 |
End bp | 2990183 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637717749 |
Product | FHA domain-containing protein |
Protein accession | YP_322916 |
Protein GI | 75908620 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.210357 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000326037 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACTCTT GGCGTAACAG GCCTTTAAGG AAAGTTCTTC TGGGAAGTTC GACTATTTTG AGGTGGCTGA TCACACTAGT ACTAGTCTTA GGTGTGGCTA GTTGTGGTGA GAAAGCTGTT AGTCAACAAG TATCCATTAG TGCAAGAGAC AAACCTCAGC AGATTTCTCA GCAATTTTCC GAAGTCTCAC CACCAGATGT GATTCAAGAA TTACGTTCTA ATTTAGAAAT TTATCAACCA CAGGTGACAA TAGTTAACCC TCAACCGGAG GAAGTGATTA GTGACAATAC TGTCTCGGTG AAGTTCCAAG TTAAGGATCT GCCAATTTTT AAGCATCCAC AATGGGATTT AGGCCCTTAT CTACACGTAA TTGTAGATAA TCAACCTTAT ATACCCGTTT ATGAACTAAG TCAGCCTTTA GTGCTGTCTG ATTTATCTCC AGGTACTCAT ACTCTGCGCG TCTTTGCTTC CCGTCCTTGG CATGAAAGTT TTAAAAATGA GGGTGCTTAC GCCCAGACGA CATTTCACGT TTTTACGAAA AGCGACGATA ATAATCCAGA CTCTAGCCTA CCTCTGTTAA CTTACAGTAG TCCTCAAGGC AATTATGGGG CAGAACCAAT CTTGTTAGAT TTTTACCTGA CTAACGCCCC TTTACATCTA GTTGCGAAAG AGCTACCCAA TGATCAATTC AGTGATTGGC GTATTCGCTG CACTATAAAT GGTGAAAGCT TTGTATTTGA TCGGTGGCAA GCAGTTTACC TCAAAGGTTT TAAACCTGGA AAAAATTGGG TGAAGCTGGA ATTCCTCGAC AATCAAGGGA ATCCAGTCAA GAATGCTTTT AATACTACAG TCAGACTTTT TGACTACCAA CCCAATGGTA AAGATTCTTT GTCCAGAATT ATTAGGGGAG AATTAAAAGC TGAGGAAGTC CGTGGTATTG TAGACCCGAC TTATGAGGCT AAACCATCGT TTGCAGAACC AACACCTGCG GCAACTCCTA GCCCAGAACC AGAAAAATCA GCATTACCGG AAGTTACGGA AACAGTTCCT ACCCCTGAAG CTACTGAACC ATCACAAACA GCAACTCCTG AACCAGAAAA ACCTAAAAAC GGTGGATTTT TTAGCCGTCC TCGTCCTCAA CCTTCGCCTA GTCTGACTCC GACATTACCA AAGGTAATTG AGTCGCCTGT ACCACAACCA GAGGTAACAC CCATACCATC ACCGACAGTC ACCCCAGAAC CACAACCAGA GGTAACACCC ACAGCATCAC CGACAGTTAC CCCAGAACCA CAACCAGAGG TAACACCTAC ATTGCCAGCT GAATCACAAG AAAAACCAGT GACTCAACGG AAGAAAGTCA ACTTGGGTGA TTACTTCAAA CGTCGTCCAC GTTCTACAAC AACACAAACA CCTACAGTCA CAGAACAGCC AGCAGAAGAG ATGCCAGCAG AATCATTAGA ATCTAATTGA
|
Protein sequence | MNSWRNRPLR KVLLGSSTIL RWLITLVLVL GVASCGEKAV SQQVSISARD KPQQISQQFS EVSPPDVIQE LRSNLEIYQP QVTIVNPQPE EVISDNTVSV KFQVKDLPIF KHPQWDLGPY LHVIVDNQPY IPVYELSQPL VLSDLSPGTH TLRVFASRPW HESFKNEGAY AQTTFHVFTK SDDNNPDSSL PLLTYSSPQG NYGAEPILLD FYLTNAPLHL VAKELPNDQF SDWRIRCTIN GESFVFDRWQ AVYLKGFKPG KNWVKLEFLD NQGNPVKNAF NTTVRLFDYQ PNGKDSLSRI IRGELKAEEV RGIVDPTYEA KPSFAEPTPA ATPSPEPEKS ALPEVTETVP TPEATEPSQT ATPEPEKPKN GGFFSRPRPQ PSPSLTPTLP KVIESPVPQP EVTPIPSPTV TPEPQPEVTP TASPTVTPEP QPEVTPTLPA ESQEKPVTQR KKVNLGDYFK RRPRSTTTQT PTVTEQPAEE MPAESLESN
|
| |