Gene Ava_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2404 
Symbol 
ID3683203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2988714 
End bp2990183 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content43% 
IMG OID637717749 
ProductFHA domain-containing protein 
Protein accessionYP_322916 
Protein GI75908620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.210357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000326037 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTCTT GGCGTAACAG GCCTTTAAGG AAAGTTCTTC TGGGAAGTTC GACTATTTTG 
AGGTGGCTGA TCACACTAGT ACTAGTCTTA GGTGTGGCTA GTTGTGGTGA GAAAGCTGTT
AGTCAACAAG TATCCATTAG TGCAAGAGAC AAACCTCAGC AGATTTCTCA GCAATTTTCC
GAAGTCTCAC CACCAGATGT GATTCAAGAA TTACGTTCTA ATTTAGAAAT TTATCAACCA
CAGGTGACAA TAGTTAACCC TCAACCGGAG GAAGTGATTA GTGACAATAC TGTCTCGGTG
AAGTTCCAAG TTAAGGATCT GCCAATTTTT AAGCATCCAC AATGGGATTT AGGCCCTTAT
CTACACGTAA TTGTAGATAA TCAACCTTAT ATACCCGTTT ATGAACTAAG TCAGCCTTTA
GTGCTGTCTG ATTTATCTCC AGGTACTCAT ACTCTGCGCG TCTTTGCTTC CCGTCCTTGG
CATGAAAGTT TTAAAAATGA GGGTGCTTAC GCCCAGACGA CATTTCACGT TTTTACGAAA
AGCGACGATA ATAATCCAGA CTCTAGCCTA CCTCTGTTAA CTTACAGTAG TCCTCAAGGC
AATTATGGGG CAGAACCAAT CTTGTTAGAT TTTTACCTGA CTAACGCCCC TTTACATCTA
GTTGCGAAAG AGCTACCCAA TGATCAATTC AGTGATTGGC GTATTCGCTG CACTATAAAT
GGTGAAAGCT TTGTATTTGA TCGGTGGCAA GCAGTTTACC TCAAAGGTTT TAAACCTGGA
AAAAATTGGG TGAAGCTGGA ATTCCTCGAC AATCAAGGGA ATCCAGTCAA GAATGCTTTT
AATACTACAG TCAGACTTTT TGACTACCAA CCCAATGGTA AAGATTCTTT GTCCAGAATT
ATTAGGGGAG AATTAAAAGC TGAGGAAGTC CGTGGTATTG TAGACCCGAC TTATGAGGCT
AAACCATCGT TTGCAGAACC AACACCTGCG GCAACTCCTA GCCCAGAACC AGAAAAATCA
GCATTACCGG AAGTTACGGA AACAGTTCCT ACCCCTGAAG CTACTGAACC ATCACAAACA
GCAACTCCTG AACCAGAAAA ACCTAAAAAC GGTGGATTTT TTAGCCGTCC TCGTCCTCAA
CCTTCGCCTA GTCTGACTCC GACATTACCA AAGGTAATTG AGTCGCCTGT ACCACAACCA
GAGGTAACAC CCATACCATC ACCGACAGTC ACCCCAGAAC CACAACCAGA GGTAACACCC
ACAGCATCAC CGACAGTTAC CCCAGAACCA CAACCAGAGG TAACACCTAC ATTGCCAGCT
GAATCACAAG AAAAACCAGT GACTCAACGG AAGAAAGTCA ACTTGGGTGA TTACTTCAAA
CGTCGTCCAC GTTCTACAAC AACACAAACA CCTACAGTCA CAGAACAGCC AGCAGAAGAG
ATGCCAGCAG AATCATTAGA ATCTAATTGA
 
Protein sequence
MNSWRNRPLR KVLLGSSTIL RWLITLVLVL GVASCGEKAV SQQVSISARD KPQQISQQFS 
EVSPPDVIQE LRSNLEIYQP QVTIVNPQPE EVISDNTVSV KFQVKDLPIF KHPQWDLGPY
LHVIVDNQPY IPVYELSQPL VLSDLSPGTH TLRVFASRPW HESFKNEGAY AQTTFHVFTK
SDDNNPDSSL PLLTYSSPQG NYGAEPILLD FYLTNAPLHL VAKELPNDQF SDWRIRCTIN
GESFVFDRWQ AVYLKGFKPG KNWVKLEFLD NQGNPVKNAF NTTVRLFDYQ PNGKDSLSRI
IRGELKAEEV RGIVDPTYEA KPSFAEPTPA ATPSPEPEKS ALPEVTETVP TPEATEPSQT
ATPEPEKPKN GGFFSRPRPQ PSPSLTPTLP KVIESPVPQP EVTPIPSPTV TPEPQPEVTP
TASPTVTPEP QPEVTPTLPA ESQEKPVTQR KKVNLGDYFK RRPRSTTTQT PTVTEQPAEE
MPAESLESN