Gene Ava_2376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2376 
Symbol 
ID3683219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp2955892 
End bp2956395 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content44% 
IMG OID637717722 
Productpentapeptide repeat-containing protein 
Protein accessionYP_322889 
Protein GI75908593 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0340424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA GAAGAGAAAG ACTTAACAGC GAAAAATTGC TCAAAAGATA CGCAGCTGGA 
GAAAGAAATT TTTCGGGAAT TATATTTAGC TCCTCGACGC TGGATGGAGA AGATTTGCGC
TCTATTGATT TGAGTGAAGC TGATTTGATT AGAGTTGATT TGAGTGGCAC CAACCTGAGC
AATGCTGATT TGAGTGGAGC TAGGCTACTC TGTGCTAACC TGACTGCTGC TAATCTTGAA
GGTGCTAATT TGTCTGGGGC TGACCTAAGT GGTGCAGATT GTATAGGGAC TAACTTCAGA
GATGCCAACC TTAACGAAAC TATTTTGAGT GGTACTGATT TTACTGCGGC TGACTTGTGT
GGAGTAGAAA TGGATGATGC TATTGTGATT GCAGCCGACT TCAGGGCTGC CCAAAATTTC
AGTAGTCCCG GCCAAGGTTC TTTGGTCTGT AAAACCTTTT GGGCAGATGG GGACTTCTTC
AAAGGCCCCG ACTGGTATGA ATAG
 
Protein sequence
MADRRERLNS EKLLKRYAAG ERNFSGIIFS SSTLDGEDLR SIDLSEADLI RVDLSGTNLS 
NADLSGARLL CANLTAANLE GANLSGADLS GADCIGTNFR DANLNETILS GTDFTAADLC
GVEMDDAIVI AADFRAAQNF SSPGQGSLVC KTFWADGDFF KGPDWYE