Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2350 |
Symbol | |
ID | 3683465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2916476 |
End bp | 2918926 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637717695 |
Product | filamentous haemagglutinin-like protein |
Protein accession | YP_322863 |
Protein GI | 75908567 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.883366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAA CTTTTGTCGG GTTTGGTGTG CTGAGTGTAA TCTGGTTATC TGCTGTTTAC AACTATAGTG TTCACGCACA AGTAACTCCC GATAATACTC TCAATACTTC TGTTACTTCG ACTACTTCCA TGAGTGGAAG CAATAGTTAC ACTATCAACA ATGGCACTCG TGTTGGGAAT AATTTATTTC ATAGTTTCAG CCAATTCTCT ATACTCAGTG GCGGTTCTGC TTCATTTGAC AATGCCACTG ATATCCAAAA TATTTTTAGT CGGGTGACTG GTGGTAATAT TTCCAACATT GATGGTGACA TCAGTGCCAA AGGTAGCGCC AACTTATTCT TACTCAACCC CGCAGGGGTT ATTTTTGGGC AAAATGCCAG CTTAAATATT GGTGGTTCCT TTATAACCAC AACTGCTAAT AGTATAAAGT TTGCCGATGG GACAGAATTT AGTGCTTTGC AAGGTGCGGA TCAACCTTTG CTGACAATGA GCGCACCAGT GGGCTTGCAA ATGGGCAGTA ATTCTGCTTC TATCAAAACT CAAGGAAGAG GATATGCAAA TAGCGGTTCT TTTATCGTTC CCACACCCAA CTCGACAGAA CTACAGGTGA ACCCAGGGAA AACCTTAGCA TTGGTGGGTG GTAATTTACA AATAGACGGG TTTATATTGA ATGCTCCAGA AGGGCGGGTA GAACTGGGTA GTACAAACGG AACTGGGCAA GTTAGTTTAA TCCCAAATGC ACAAGGTTAT ACTCTGGGTC ATGAGGATGA ACAAATTTTT GGTGATATTC AATTAGCCAA AAAGTCACTT ATAAACGTAA GTGGTGTAAA TTCAGGTTCG GTTCGTCTAC AAGCAAGAAA TATCCTTTTA ACAGACGGTT CATTGATACT TGCACAAAAT TATGGCTATC TTCCTGGTGG AGAAATTAGC CTTCAAGCAT CAACAGCAAT TGATTTAATT GGCAGAAGTA GTGATGGAAA TGTGTTGAGT GGAGTTCGTA GCGAAACTTA TGGAATTGGA GCAGGTGGAA ATATTGGTAT TTTTACTCGA AAACTTACTC TCCAAGAAGG AAGTGGTTTA AATAATATAA CTTTGGGAAC TGCTCCTAGT GGCAATATTG AAATTAATGC GAAAACAATT GAAATATCAG GTTTTTCGCA AGTAAACCCG AATGGAGTTA CTAGCATTGG TACTTTGAGT TTTGCTTCTG GTAGTGCTGG TGATGTATTC GCTAATAGTG ATAATTTACT AATATCCGGT GGAGCTTCCC TTTCTTCGGT TACGTTTGGT AGTGGAAGTA GTGGTAAAGT TTCAATTCGC AATCAAAACA CCACAGTTAT TGGAAACAGC CCTTCAGGAT TTGATAGTGC GATTACTTTA GCTACATTCG CGTTCGGAGA TAACAAAGAT TTGATACTGG ATACTGGCAA ATTACAAATT TTAGATGGGG GAAGAATTGG TTCATCTACA CTGTTTGCTG GTAACGGGGG AAATGTAAGT ATCAATGCAA GTGAAGCAAT CACAATTAGT GGACGTAACG ATAATAACAA CAGTGCAATT AATTCTTCCG CAACGCGTCT TAATGCACAG TTGCGTCAAT CATTTGGCTT TCCAGATATG CTGACGGCAA ACGCTGGTAG TCTTAGTATT ACGACACCAA ATCTGATACT GACGGATGGT GCTACTGTGA CTGTAACGAG TGAAGGTACT GGTAATGCCG GCAACCTTAA CGTTATTGCA GATATTATCC AATTAAAAAA TCAGGCGTTG ATTCAAGCAC AGACCGAATC TGGTAATGGT GGAGATATAG ACTTAAAGGT GGGAAGTTTG CTGTTAATGC GCGATCGCAG TAAGATTACA ACCACAGCAG GCAGTACGGG TAATGGCGGC AATATCAACA TTAATTCACC CACCATTGTT GGCTTAGAAA ATAGCGACAT CACAGCTAAT GCTGTTCGCG GTAAAGGTGG CAATATTAAC ATCACTACTC AGGGAATTAT CGGTTTAGAG TACCGTTCGC AACTAACACC AGAAAATGAT ATTACGGCCA GTTCAGAGTT TGGGGTGAAT GGTACAGTGC AAGTCGATAA CGTCGGTGTA GATCCGAATT CGGGTTTAGT GGCATTACCA ACCAATTTTA CCGATTCATC CCAAAAAATT GCTAGTGGAT GTGCAGATAA CAGTGGTAGT AGTTTCGTCG CTACAGGACG GGGTGGTGTA CCGCAGAATC CCAATCAGGA ATTAAGGAGC GATCGCACCT GGTCAGATAT CCGTGATATG TCTGAATACC GCAATACTGG CGCAGTGACA GCACAAATTC CCAAATTTCT GGTTCTTGTC CAAGCCACTG GTTGGCGACA TAATGCTCAA GGAAAAATCG AGTTAGTTGC GGATAAATCT TCTGCTCAGG TGAAACCAGC ATTAACCTGT GCGCCAGTGG CTCAAAGCTA A
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Protein sequence | MKLTFVGFGV LSVIWLSAVY NYSVHAQVTP DNTLNTSVTS TTSMSGSNSY TINNGTRVGN NLFHSFSQFS ILSGGSASFD NATDIQNIFS RVTGGNISNI DGDISAKGSA NLFLLNPAGV IFGQNASLNI GGSFITTTAN SIKFADGTEF SALQGADQPL LTMSAPVGLQ MGSNSASIKT QGRGYANSGS FIVPTPNSTE LQVNPGKTLA LVGGNLQIDG FILNAPEGRV ELGSTNGTGQ VSLIPNAQGY TLGHEDEQIF GDIQLAKKSL INVSGVNSGS VRLQARNILL TDGSLILAQN YGYLPGGEIS LQASTAIDLI GRSSDGNVLS GVRSETYGIG AGGNIGIFTR KLTLQEGSGL NNITLGTAPS GNIEINAKTI EISGFSQVNP NGVTSIGTLS FASGSAGDVF ANSDNLLISG GASLSSVTFG SGSSGKVSIR NQNTTVIGNS PSGFDSAITL ATFAFGDNKD LILDTGKLQI LDGGRIGSST LFAGNGGNVS INASEAITIS GRNDNNNSAI NSSATRLNAQ LRQSFGFPDM LTANAGSLSI TTPNLILTDG ATVTVTSEGT GNAGNLNVIA DIIQLKNQAL IQAQTESGNG GDIDLKVGSL LLMRDRSKIT TTAGSTGNGG NININSPTIV GLENSDITAN AVRGKGGNIN ITTQGIIGLE YRSQLTPEND ITASSEFGVN GTVQVDNVGV DPNSGLVALP TNFTDSSQKI ASGCADNSGS SFVATGRGGV PQNPNQELRS DRTWSDIRDM SEYRNTGAVT AQIPKFLVLV QATGWRHNAQ GKIELVADKS SAQVKPALTC APVAQS
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