| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2345 |
|---|
| Symbol | |
|---|
| ID | 3683460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 2909047 |
|---|
| End bp | 2909709 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637717690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_322858 |
|---|
| Protein GI | 75908562 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0398] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.496256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATG CTAAAACCAG TTTCGCCTTA TTGATGGCTG TGTGTCTCAT AGCCACCGGA
GTTACAGGAT ATCTACTGGG GGGAATTAAT CCAGAGTTAA TTCAAGGTTG GTTAAAGGCT
GCGGGGATTT GGGCCCCTGT TACTTATGTA GCTGTATATG TGGTTGCGAC TATTTTAATT
TTGCCATCAA CAGCATTGAA TTTAACTGGT GGAGCGATTT TTGGCCCCTG GATGGGGACA
TTCTGGACAA GTGTAGGTGC AATTATTGCG GCGATCGCTG CCTTCATTTT TGCGCGGACA
GTAGGACGGG AAATTGTGGC TCAACGACTC GCCGGACGTT GGCAGGCTAT CGATGCCGAA
GTCAAGCAGG GAGCCGTTTT TTATATGTTT GCTATCCGCT TGATGCCCAT CCTGCCCTAT
GGACTAGTCA ATTTTGCTGC CGGTTTGACA TCAATCAGCT TCCAGGATTA CCTAATTGGT
ACAGCCTTGG GAACAGTACC CGGAATCTTA CCGTTTGTCC TCTTGGGGAG TTCCGGCTTA
AAAGCCATCC GCACTGGTGA GGTTCTACCA TTAGTTGGTG CTTTGGCATT GATTGGAATG
CTAGTTGGTG GTTCCACTTG GTATCGTCGT CGTCGCTCTT TTCCCACTCG TAAAAAACCC
TAA
|
|---|
| Protein sequence | MLNAKTSFAL LMAVCLIATG VTGYLLGGIN PELIQGWLKA AGIWAPVTYV AVYVVATILI
LPSTALNLTG GAIFGPWMGT FWTSVGAIIA AIAAFIFART VGREIVAQRL AGRWQAIDAE
VKQGAVFYMF AIRLMPILPY GLVNFAAGLT SISFQDYLIG TALGTVPGIL PFVLLGSSGL
KAIRTGEVLP LVGALALIGM LVGGSTWYRR RRSFPTRKKP
|
|---|
| |